COVID-19

(““)

Papers about COVID-19 research at Caltech

combined from CaltechAUTHORS

• Dedhe, Abhishek M.; Chowkase, Aakash A.; et el. (2024) Conventional and frugal methods of estimating COVID-19-related excess deaths and undercount factors; Scientific Reports; Vol. 14; 10378; 10.1038/s41598-024-57634-6
• Wang, Eric; Cohen, Alexander A.; et el. (2024) Designed mosaic nanoparticles enhance cross-reactive immune responses in mice; PMCID PMC10925254; 10.1101/2024.02.28.582544
• Kim, Soo-Kyung; Suebka, Sartanee; et el. (2024) Methotrexate Inhibits the Binding of the Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Receptor Binding Domain to the Host-Cell Angiotensin-Converting Enzyme-2 (ACE-2) Receptor; ACS Pharmacology & Translational Science; Vol. 7; No. 2; 348-362; PMCID PMC10863433; 10.1021/acsptsci.3c00197
• Cohen, Alexander A.; Keeffe, Jennifer R.; et el. (2024) Mosaic sarbecovirus vaccination elicits cross-reactive responses in pre-immunized animals; PMCID PMC10871317; 10.1101/2024.02.08.576722
• Pushpawela, Buddhi; Chea, Peter; et el. (2023) Quantification of face seal leakage using parallel resistance model; Physics of Fluids; Vol. 35; No. 12; 127127; 10.1063/5.0177717
• Lin, Tuo; Karthikeyan, Smruthi; et el. (2023) Optimizing campus-wide COVID-19 test notifications with interpretable wastewater time-series features using machine learning models; Scientific Reports; Vol. 13; 20670; PMCID PMC10673837; 10.1038/s41598-023-47859-2
• Cohen, Alexander A.; van Doremalen, Neeltje; et el. (2023) Mosaic RBD nanoparticles protect against multiple sarbecovirus challenges in animal models; PMCID PMC8978945; 10.1101/2022.03.25.485875
• Rouhani, Nina; Stanley, Damian; et el. (2023) Collective events and individual affect shape autobiographical memory; Proceedings of the National Academy of Sciences of the United States of America; Vol. 120; No. 29; Art. No. e2221919120; PMCID PMC10629560; 10.1073/pnas.2221919120
• Papini, Santiago; López-Castro, Teresa; et el. (2023) Alcohol, cannabis, and nicotine use have distinct associations with COVID-19 pandemic-related experiences: An exploratory Bayesian network analysis across two timepoints; Drug and Alcohol Dependence; Vol. 248; Art. No. 109929; PMCID PMC10186931; 10.1016/j.drugalcdep.2023.109929
• Winnett, Alexander Viloria; Akana, Reid; et el. (2023) Daily SARS-CoV-2 Nasal Antigen Tests Miss Infected and Presumably Infectious People Due to Viral Load Differences among Specimen Types; Microbiology Spectrum; Vol. 11; No. 4; e01295-23; PMCID PMC10434058; 10.1128/spectrum.01295-23
• Hoffmann, Magnus A. G.; Yang, Zhi; et el. (2023) ESCRT recruitment to SARS-CoV-2 spike induces virus-like particles that improve mRNA vaccines; Cell; Vol. 186; No. 11; 2380-2391; PMCID PMC10121106; 10.1016/j.cell.2023.04.024
• Shrock, Ellen L.; Timms, Richard T.; et el. (2023) Germline-encoded amino acid–binding motifs drive immunodominant public antibody responses; Science; Vol. 380; No. 6640; Art. No. eadc9498; PMCID PMC10273302; 10.1126/science.adc9498
• Xu, Yang; Yao, Yuxing; et el. (2023) Magnetocontrollable droplet mobility on liquid crystal-infused porous surfaces; Nano Research; Vol. 16; No. 4; 5098-5107; PMCID PMC9768411; 10.1007/s12274-022-5318-y
• Schulte, Samuel J.; Huang, Jining; et el. (2023) HCR Lateral Flow Assays for Amplified Instrument-Free At-Home SARS-CoV-2 Testing; 10.1101/2022.09.18.508442
• Braet, Sean M.; Buckley, Theresa S. C.; et el. (2023) Timeline of changes in spike conformational dynamics in emergent SARS-CoV-2 variants reveal progressive stabilization of trimer stalk and enhanced NTD dynamics; 10.1101/2022.08.26.505369
• Zvyagin, Maxim; Brace, Alexander; et el. (2023) GenSLMs: Genome-scale language models reveal SARS-CoV-2 evolutionary dynamics; PMCID PMC9709791; 10.1101/2022.10.10.511571
• Hills, Rory A.; Tan, Tiong Kit; et el. (2023) Multiviral Quartet Nanocages Elicit Broad Anti-Coronavirus Responses for Proactive Vaccinology; PMCID PMC9980174; 10.1101/2023.02.24.529520
• Hoffmann, Magnus A. G.; Yang, Zhi; et el. (2023) ESCRT recruitment to mRNA-encoded SARS-CoV-2 spike induces virus-like particles and enhanced antibody responses; PMCID PMC9810232; 10.1101/2022.12.26.521940
• Braet, Sean M.; Buckley, Theresa S. C.; et el. (2023) Timeline of changes in spike conformational dynamics in emergent SARS-CoV-2 variants reveal progressive stabilization of trimer stalk with altered NTD dynamics; eLife; Vol. 12; Art. No. e82584; PMCID PMC10049203; 10.7554/elife.82584
• Schulte, Samuel J.; Huang, Jining; et el. (2023) Hybridization Chain Reaction Lateral Flow Assays for Amplified Instrument-Free At-Home SARS-CoV-2 Testing; ACS Infectious Diseases; Vol. 9; No. 3; 450-458; PMCID PMC9924079; 10.1021/acsinfecdis.2c00472
• Ji, Jenny; Winnett, Alexander Viloria; et el. (2023) Index Cases First Identified by Nasal-Swab Rapid COVID-19 Tests Had More Transmission to Household Contacts Than Cases Identified by Other Test Types; 10.1101/2023.03.09.23286855
• Winnett, Alexander Viloria; Akana, Reid; et el. (2023) Extreme differences in SARS-CoV-2 viral loads among respiratory specimen types during presumed pre-infectious and infectious periods; PNAS Nexus; Vol. 2; No. 3; pgad033; PMCID PMC10013338; 10.1093/pnasnexus/pgad033
• Fielding-Miller, Rebecca; Karthikeyan, Smruthi; et el. (2023) Safer at school early alert: an observational study of wastewater and surface monitoring to detect COVID-19 in elementary schools; Lancet Regional Health - Americas; Vol. 19; Art. No. 100449; PMCID PMC9939935; 10.1016/j.lana.2023.100449
• Rusch, Tessa; Han, Yanting; et el. (2023) COVID-Dynamic: a large-scale longitudinal study of socioemotional and behavioral change across the pandemic; Scientific Data; Vol. 10; Art. No. 71; PMCID PMC9897616; 10.1038/s41597-022-01901-6
• Sellam, Abdellah Zakaria; Benlamoudi, Azeddine; et el. (2023) Deep Learning Solution for Quantification of Fluorescence Particles on a Membrane; Sensors; Vol. 23; No. 4; Art. No. 1794; PMCID PMC9967937; 10.3390/s23041794
• López-Castro, Teresa; Papini, Santiago; et el. (2023) Posttraumatic stress disorder symptom trajectories in a 16-month COVID-19 pandemic period; Journal of Traumatic Stress; Vol. 36; No. 1; 180-192; PMCID PMC9880687; 10.1002/jts.22899
• Carter, Alyssa M.; Winnett, Alexander Viloria; et el. (2023) Laboratory Evaluation Links Some False-Positive COVID-19 Antigen Test Results Observed in a Field Study to a Specific Lot of Test Strips; Open Forum Infectious Diseases; Vol. 10; No. 1; Art. No. ofac701; PMCID PMC9887260; 10.1093/ofid/ofac701
• Periyakoil, Divya; Periyakoil, Preethi; et el. (2023) Are There Differences between the Stress Responses of Philippine Men and Women to the COVID-19 Pandemic?; International Journal of Environmental Research and Public Health; Vol. 20; No. 3; Art. No. 2326; PMCID PMC9915070; 10.3390/ijerph20032326
• Huang, Kuan-Ying A.; Chen, Xiaorui; et el. (2023) Structural basis for a conserved neutralization epitope on the receptor-binding domain of SARS-CoV-2; Nature Communications; Vol. 14; Art. No. 311; PMCID PMC9852238; 10.1038/s41467-023-35949-8
• Dommer, Abigail; Casalino, Lorenzo; et el. (2023) #COVIDisAirborne: AI-enabled multiscale computational microscopy of delta SARS-CoV-2 in a respiratory aerosol; International Journal of High Performance Computing Applications; Vol. 37; No. 1; 28-44; PMCID PMC9527558; 10.1177/10943420221128233
• Wang, Zichao; Nie, Weili; et el. (2022) Retrieval-based Controllable Molecule Generation; 10.48550/arXiv.2208.11126
• Winnett, Alexander Viloria; Porter, Michael K.; et el. (2022) Morning SARS-CoV-2 Testing Yields Better Detection of Infection Due to Higher Viral Loads in Saliva and Nasal Swabs upon Waking; Microbiology Spectrum; Vol. 10; No. 6; e03873-22; PMCID PMC9769854; 10.1128/spectrum.03873-22
• Kim, Soo-Kyung; Suebka, Sartanee; et el. (2022) Prediction and experimental validation of drug candidates that bind specifically to the SARS-CoV-2 receptor-binding domain to prevent entry via Angiotensin-converting enzyme 2 (ACE2); 10.26434/chemrxiv-2022-nrhzz
• Karthikeyan, Smruthi; Levy, Joshua I.; et el. (2022) Wastewater sequencing uncovers early, cryptic SARS-CoV-2 variant transmission; PMCID PMC8996633; 10.1101/2021.12.21.21268143
• Harris-Lovett, Sasha; Nelson, Kara; et el. (2022) Wastewater surveillance for SARS-CoV-2 on college campuses: Initial efforts, lessons learned and research needs; PMCID PMC7872386; 10.1101/2021.02.01.21250952
• Knyazev, Sergey; Chhugani, Karishma; et el. (2022) Unlocking capacities of viral genomics for the COVID-19 pandemic response; PMCID PMC8095210; 10.48550/arXiv.2104.14005
• Fan, Chengcheng; Cohen, Alexander A.; et el. (2022) Neutralizing monoclonal antibodies elicited by mosaic RBD nanoparticles bind conserved sarbecovirus epitopes; Immunity; Vol. 55; No. 12; 2419-2435.e10; PMCID PMC9606073; 10.1016/j.immuni.2022.10.019
• Cable, Jennifer; Fauci, Anthony; et el. (2022) Lessons from the pandemic: Responding to emerging zoonotic viral diseases — a Keystone Symposia report; Annals of the New York Academy of Sciences; Vol. 1518; No. 1; 209-225; PMCID PMC9538336; 10.1111/nyas.14898
• Satta, Sandro; Shahabipour, Fahimeh; et el. (2022) Engineering viral genomics and nano-liposomes in microfluidic platforms for patient-specific analysis of SARS-CoV-2 variants; Theranostics; Vol. 12; No. 10; 4779-4790; PMCID PMC9254234; 10.7150/thno.72339
• Karthikeyan, Smruthi; Levy, Joshua I.; et el. (2022) Wastewater sequencing reveals early cryptic SARS-CoV-2 variant transmission; Nature; Vol. 609; No. 7925; 101-108; PMCID PMC9433318; 10.1038/s41586-022-05049-6
• Ravanfar, Raheleh; Sheng, Yuling; et el. (2022) Surface cysteines could protect the SARS-CoV-2 main protease from oxidative damage; Journal of Inorganic Biochemistry; Vol. 234; Art. No. 111886; PMCID PMC9161685; 10.1016/j.jinorgbio.2022.111886
• Harrison, Neil L.; Abbott, Geoffrey W.; et el. (2022) How many SARS-CoV-2 “viroporins” are really ion channels?; Communications Biology; Vol. 5; No. 1; 10.1038/s42003-022-03669-2
• Białobrzeska, Wioleta; Ficek, Mateusz; et el. (2022) Performance of electrochemical immunoassays for clinical diagnostics of SARS-CoV-2 based on selective nucleocapsid N protein detection: Boron-doped diamond, gold and glassy carbon evaluation; Biosensors and Bioelectronics; Vol. 209; Art. No. 114222; PMCID PMC8989705; 10.1016/j.bios.2022.114222
• Cramer, Estee Y.; Huang, Yuxin; et el. (2022) The United States COVID-19 Forecast Hub dataset; Scientific Data; Vol. 9; Art. No. 462; PMCID PMC8236414; 10.1038/s41597-022-01517-w
• Winnett, Alexander Viloria; Akana, Reid; et el. (2022) Extreme differences in SARS-CoV-2 viral loads among respiratory specimen types during presumed pre-infectious and infectious periods; 10.1101/2022.07.13.22277113
• Winnett, Alexander Viloria; Akana, Reid; et el. (2022) Why Daily SARS-CoV-2 Nasal Rapid Antigen Testing Poorly Detects Infected and Infectious Individuals; 10.1101/2022.07.13.22277513
• Schneider, Tapio; Dunbar, Oliver R. A.; et el. (2022) Epidemic management and control through risk-dependent individual contact interventions; PLoS Computational Biology; Vol. 18; No. 6; Art. No. e1010171; PMCID PMC9223336; 10.1371/journal.pcbi.1010171
• Morales, Maryann; Ravanfar, Raheleh; et el. (2022) Copper(II) Binding to the Intrinsically Disordered C-Terminal Peptide of SARS-CoV-2 Virulence Factor Nsp1; Inorganic Chemistry; Vol. 61; No. 24; 8992-8996; PMCID PMC9195567; 10.1021/acs.inorgchem.2c01329
• Luo, Qi; Weightman, Ryan; et el. (2022) Optimization of vaccination for COVID-19 in the midst of a pandemic; Networks and Heterogeneous Media; Vol. 17; No. 3; 443-466; 10.3934/nhm.2022016
• Hjorleifsson, Kristjan E.; Rognvaldsson, Solvi; et el. (2022) Reconstruction of a large-scale outbreak of SARS-CoV-2 infection in Iceland informs vaccination strategies; Clinical Microbiology and Infection; Vol. 28; No. 6; 852-858; PMCID PMC8849849; 10.1016/j.cmi.2022.02.012
• Jo, HyeongChan; Kim, Juhyun; et el. (2022) condLSTM-Q: A novel deep learning model for predicting COVID-19 mortality in fine geographical scale; Quantitative Biology; Vol. 10; No. 2; 125-138; 10.15302/J-QB-021-0276
• Jacobs, Jana L.; Bain, William; et el. (2022) Severe Acute Respiratory Syndrome Coronavirus 2 Viremia Is Associated With Coronavirus Disease 2019 Severity and Predicts Clinical Outcome; Clinical Infectious Diseases; Vol. 74; No. 9; 1525-1533; PMCID PMC9070832; 10.1093/cid/ciab686
• Cable, Jennifer; Rappuoli, Rino; et el. (2022) Innovative vaccine approaches—a Keystone Symposia report; Annals of the New York Academy of Sciences; Vol. 1511; No. 1; 59-86; 10.1111/nyas.14739
• Debnath, Ramit; Bardhan, Ronita; et el. (2022) Lockdown impacts on residential electricity demand in India: A data-driven and non-intrusive load monitoring study using Gaussian mixture models; Energy Policy; Vol. 164; Art. No. 112886; PMCID PMC9022708; 10.1016/j.enpol.2022.112886
• Knyazev, Sergey; Chhugani, Karishma; et el. (2022) Unlocking capacities of genomics for the COVID-19 response and future pandemics; Nature Methods; Vol. 19; No. 4; 374-380; PMCID PMC9467803; 10.1038/s41592-022-01444-z
• Winnett, Alexander Viloria; Porter, Michael K.; et el. (2022) Morning SARS-CoV-2 testing yields better detection of infection due to higher viral loads in saliva and nasal swabs upon waking; 10.1101/2022.03.02.22271724
• Kadakia, Shevali; Stratton, Catherine; et el. (2022) The Accessibility of YouTube Fitness Videos for Individuals Who Are Disabled Before and During the COVID-19 Pandemic: Preliminary Application of a Text Analytics Approach; JMIR Formative Research; Vol. 6; No. 2; Art. No. e34176; PMCID PMC8849230; 10.2196/34176
• Tanaka, Shiho; Olson, C. Anders; et el. (2022) Rapid identification of neutralizing antibodies against SARS-CoV-2 variants by mRNA display; Cell Reports; Vol. 38; No. 6; Art. No. 110348; PMCID PMC8769934; 10.1016/j.celrep.2022.110348
• Pushpawela, Buddhi; Amanatidis, Stavros; et el. (2022) Variability of the penetration of particles through facemasks; Aerosol Science and Technology; Vol. 56; No. 2; 186-203; 10.1080/02786826.2021.2003291
• Savela, Emily S.; Winnett, Alexander Viloria; et el. (2022) Quantitative SARS-CoV-2 Viral-Load Curves in Paired Saliva Samples and Nasal Swabs Inform Appropriate Respiratory Sampling Site and Analytical Test Sensitivity Required for Earliest Viral Detection; Journal of Clinical Microbiology; Vol. 60; No. 2; Art. No. e01785-21; PMCID PMC8849374; 10.1128/JCM.01785-21
• Nguyen, Minhphuong; Paul, Eric; et el. (2022) Risk of COVID-19 Reinfection and Vaccine Breakthrough Infection, Madera County, California, 2021; 10.1101/2022.01.22.22269105
• Zhu, Yanzhe; Wu, Xunyi; et el. (2022) Membrane-Based In-Gel Loop-Mediated Isothermal Amplification (mgLAMP) System for SARS-CoV-2 Quantification in Environmental Waters; Environmental Science and Technology; Vol. 56; No. 2; 862-873; PMCID PMC8751019; 10.1021/acs.est.1c04623
• Vanshylla, Kanika; Fan, Chengcheng; et el. (2022) Discovery of ultrapotent broadly neutralizing antibodies from SARS-CoV-2 elite neutralizers; Cell Host and Microbe; Vol. 30; No. 1; 69-82; PMCID PMC8683262; 10.1016/j.chom.2021.12.010
• Gu, Alan Y.; Zhu, Yanzhe; et el. (2022) Speech-generated aerosol settling times and viral viability can improve COVID-19 transmission prediction; Environmental Science: Atmospheres; Vol. 2; No. 1; 34-45; 10.1039/d1ea00013f
• McNeill, V. Faye; Corsi, Richard; et el. (2022) Room-level ventilation in schools and universities; Atmospheric Environment: X; Vol. 13; Art. No. 100152; PMCID PMC8789458; 10.1016/j.aeaoa.2022.100152
• Cao, Jian; Ramirez, Christina; et el. (2022) The politics of vaccine hesitancy in the United States; Social Science Quarterly; Vol. 103; No. 1; 42-54; 10.1111/ssqu.13106
• Nesterenko, Pavlo A.; McLaughlin, Jami; et el. (2021) HLA-A∗02:01 restricted T cell receptors against the highly conserved SARS-CoV-2 polymerase cross-react with human coronaviruses; Cell Reports; Vol. 37; No. 13; Art. No. 110167; PMCID PMC8660260; 10.1016/j.celrep.2021.110167
• Barnes, Christopher; Scheid, Johannes F.; et el. (2021) Structural insights into antibody-mediated neutralization of SARS-CoV-2; Glycobiology; Vol. 31; No. 12; 1696-1697; 10.1093/glycob/cwab121
• Linardi, Sera and Camerer, Colin (2021) Worker-firm relational contracts in the time of shutdowns: experimental evidence; Experimental Economics; Vol. 24; No. 4; 1267-1293; PMCID PMC7883973; 10.1007/s10683-020-09697-1
• Lovenduski, Nicole S.; Chatterjee, Abhishek; et el. (2021) On the Detection of COVID‐Driven Changes in Atmospheric Carbon Dioxide; Geophysical Research Letters; Vol. 48; No. 22; Art. No. e2021GL095396; 10.1029/2021gl095396
• Brogan, Daniel J.; Chaverra-Rodriguez, Duverney; et el. (2021) Development of a Rapid and Sensitive CasRx-Based Diagnostic Assay for SARS-CoV-2; ACS Sensors; Vol. 6; No. 11; 3957-3966; PMCID PMC8577378; 10.1021/acssensors.1c01088
• Van Rooy, Paul; Tasnia, Afsara; et el. (2021) Observations of Volatile Organic Compounds in the Los Angeles Basin during COVID-19; ACS Earth and Space Chemistry; Vol. 5; No. 11; 3045-3055; 10.1021/acsearthspacechem.1c00248
• Jiang, Yonghou; Duffy, Fergal; et el. (2021) Angiotensin II receptor I auto-antibodies following SARS-CoV-2 infection; PLoS ONE; Vol. 16; No. 11; Art. No. e0259902; PMCID PMC8598062; 10.1371/journal.pone.0259902
• Dommer, Abigail; Casalino, Lorenzo; et el. (2021) #COVIDisAirborne: AI-Enabled Multiscale Computational Microscopy of Delta SARS-CoV-2 in a Respiratory Aerosol; PMCID PMC8609898; 10.1101/2021.11.12.468428
• Brune, Karl D.; Liekniņa, Ilva; et el. (2021) N-Terminal Modification of Gly-His-Tagged Proteins with Azidogluconolactone; ChemBioChem; Vol. 22; No. 22; 3199-3207; 10.1002/cbic.202100381
• Laughner, Joshua L.; Neu, Jessica L.; et el. (2021) Societal shifts due to COVID-19 reveal large-scale complexities and feedbacks between atmospheric chemistry and climate change; Proceedings of the National Academy of Sciences; Vol. 118; No. 46; Art. No. e2109481118; PMCID PMC8609622; 10.1073/pnas.2109481118
• Lubecke, Lana C.; Ishmael, Khaldoon; et el. (2021) Identification of COVID-19 Type Respiratory Disorders Using Channel State Analysis of Wireless Communications Links; ISBN 978-1-7281-1179-7; 2021 43rd Annual International Conference of the IEEE Engineering in Medicine & Biology Society (EMBC); IEEE: Piscataway, NJ; 7582-7585; 10.1109/embc46164.2021.9630016
• Ji, Jenny; Winnett, Alexander; et el. (2021) Modulating Factors of Household Transmission of SARS‑CoV‑2 in a Community-Based Study; American Journal of Tropical Medicine and Hygiene; Vol. 105; No. 5; 313; 10.4269/ajtmh.abstract2021
• Sottile, Peter D.; Albers, David; et el. (2021) Real-time electronic health record mortality prediction during the COVID-19 pandemic: a prospective cohort study; Journal of the American Medical Informatics Association; Vol. 28; No. 11; 2354-2365; 10.1093/jamia/ocab100
• Molnár, Tamás G.; Singletary, Andrew W.; et el. (2021) Safety-Critical Control of Compartmental Epidemiological Models with Measurement Delays; IEEE Control Systems Letters; Vol. 5; No. 5; 1537-1542; PMCID PMC8545040; 10.1109/LCSYS.2020.3040948
• Cheng, Kai-Wen; Li, Shan; et el. (2021) Impacts of p97 on Proteome Changes in Human Cells during Coronaviral Replication; Cells; Vol. 10; No. 11; Art. No. 2953; PMCID PMC8616207; 10.3390/cells10112953
• Jain, Siddharth; Xiao, Xiongye; et el. (2021) Generator based approach to analyze mutations in genomic datasets; Scientific Reports; Vol. 11; Art. No. 21084; PMCID PMC8548350; 10.1038/s41598-021-00609-8
• Fielding-Miller, Rebecca; Karthikeyan, Smruthi; et el. (2021) Wastewater and surface monitoring to detect COVID-19 in elementary school settings: The Safer at School Early Alert project; PMCID PMC8547528; 10.1101/2021.10.19.21265226
• Abernathy, Morgan E.; Dam, Kim-Marie A.; et el. (2021) How Antibodies Recognize Pathogenic Viruses: Structural Correlates of Antibody Neutralization of HIV-1, SARS-CoV-2, and Zika; Viruses; Vol. 13; No. 10; Art. No. 2106; PMCID PMC8537525; 10.3390/v13102106
• Trifan, Anda; Gorgun, Defne; et el. (2021) Intelligent Resolution: Integrating Cryo-EM with AI-driven Multi-resolution Simulations to Observe the SARS-CoV-2 Replication-Transcription Machinery in Action; 10.1101/2021.10.09.463779
• Shahrestani, Shane; Chou, Tzu-Chieh; et el. (2021) A wearable eddy current based pulmonary function sensor for continuous non-contact point-of-care monitoring during the COVID-19 pandemic; Scientific Reports; Vol. 11; Art. No. 20144; PMCID PMC8505507; 10.1038/s41598-021-99682-2
• Rusch, Tessa; Han, Yanting; et el. (2021) COVID-Dynamic: A large-scale multifaceted longitudinal study of socioemotional and behavioral change across the pandemic; 10.31234/osf.io/75eyx
• Perdomo, Sammy A.; Ortega, Viviana; et el. (2021) SenSARS: A Low-Cost Portable Electrochemical System for Ultra-Sensitive, Near Real-Time, Diagnostics of SARS-CoV-2 Infections; IEEE Transactions on Instrumentation and Measurement; Vol. 70; Art. No. 4007710-10; PMCID PMC8843068; 10.1109/tim.2021.3119147
• Jette, Claudia A.; Cohen, Alexander A.; et el. (2021) Broad cross-reactivity across sarbecoviruses exhibited by a subset of COVID-19 donor-derived neutralizing antibodies; Cell Reports; Vol. 36; No. 13; Art. No. 109760; PMCID PMC8423902; 10.1016/j.celrep.2021.109760
• Ullah, Irfan; Prévost, Jérémie; et el. (2021) Live imaging of SARS-CoV-2 infection in mice reveals that neutralizing antibodies require Fc function for optimal efficacy; Immunity; Vol. 54; No. 9; 2143-2158; PMCID PMC8372518; 10.1016/j.immuni.2021.08.015
• Agranov, Marina; Elliott, Matt; et el. (2021) The importance of Social Norms against Strategic Effects: The case of Covid-19 vaccine uptake; Economics Letters; Vol. 206; Art. No. 109979; PMCID PMC8252706; 10.1016/j.econlet.2021.109979
• Green, Sydnee A.; Wigman, Benjamin; et el. (2021) Chemocatalytic Amplification Probes Enable Transcriptionally-Regulated Au(I)-Catalysis in E. coli and Sensitive Detection of SARS-CoV-2 RNA Fragments; 10.26434/chemrxiv.12915761.v2
• Wang, Xin; Zhan, Zhongwen; et el. (2021) Ground vibrations recorded by fiber-optic cables reveal traffic response to COVID-19 lockdown measures in Pasadena, California; Communications Earth & Environment; Vol. 2; No. 1; Art. No. 160; 10.1038/s43247-021-00234-3
• Muecksch, Frauke; Weisblum, Yiska; et el. (2021) Affinity maturation of SARS-CoV-2 neutralizing antibodies confers potency, breadth, and resilience to viral escape mutations; Immunity; Vol. 54; No. 8; 1853-1868; PMCID PMC8323339; 10.1016/j.immuni.2021.07.008
• West, Anthony P., Jr.; Wertheim, Joel O.; et el. (2021) Detection and characterization of the SARS-CoV-2 lineage B.1.526 in New York; Nature Communications; Vol. 12; Art. No. 4886; PMCID PMC8352861; 10.1038/s41467-021-25168-4
• Hensley, Matthew K.; Bain, William G.; et el. (2021) Intractable Coronavirus Disease 2019 (COVID-19) and Prolonged Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Replication in a Chimeric Antigen Receptor-Modified T-Cell Therapy Recipient: A Case Study; Clinical Infectious Diseases; Vol. 73; No. 3; e815-e821; PMCID PMC7929077; 10.1093/cid/ciab072
• Booeshaghi, A. Sina and Pachter, Lior (2021) Normalization of single-cell RNA-seq counts by log(x+1)* or log(1+x)*; Bioinformatics; Vol. 37; No. 15; 2223-2224; PMCID PMC7989636; 10.1093/bioinformatics/btab085
• Greenwald, Hannah D.; Kennedy, Lauren C.; et el. (2021) Tools for interpretation of wastewater SARS-CoV-2 temporal and spatial trends demonstrated with data collected in the San Francisco Bay Area; Water Research X; Vol. 12; Art. No. 100111; PMCID PMC8325558; 10.1016/j.wroa.2021.100111
• Bjorkman, Pamela (2021) Neutralizing antibodies against coronaviruses; Microscopy and Microanalysis; Vol. 27; No. S1; 1112-1113; 10.1017/s1431927621004177
• Bjorkman, Pamela J. (2021) Neutralizing antibodies against coronaviruses
• Li, Jing; Zhu, Yanzhe; et el. (2021) Rapid and Inexpensive point-of-use (POU) testing for SARS-CoV-2 quantification with membrane-based in-gel loop-mediated isothermal amplification (mgLAMP) system
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