Fraser, Scott E.
Jacky, Lucien and Yurk, Dominic, et el. (2021) Robust Multichannel Encoding for Highly Multiplexed Quantitative PCR ; Analytical Chemistry; Vol. 93; No. 9; 4208-4216; 10.1021/acs.analchem.0c04626
Trivedi, Vikas and Madaan, Sara, et el. (2021) Imaging the Beating Heart with Macroscopic Phase Stamping ; 10.48550/arXiv.2011.01688
Rajagopal, Aditya and Yurk, Dominic, et el. (2019) Significant Expansion of Real-Time PCR Multiplexing with Traditional Chemistries using Amplitude Modulation ; Scientific Reports; Vol. 9; Art. No. 1053; PMCID PMC6355831; 10.1038/s41598-018-37732-y
Li, Yuwei and Junge, Jason A., et el. (2018) Discs large 1 controls daughter-cell polarity after cytokinesis in vertebrate morphogenesis ; Proceedings of the National Academy of Sciences of the United States of America; Vol. 115; No. 46; E10859-E10868; PMCID PMC6243286; 10.1073/pnas.1713959115
Trivedi, Vikas and Choi, Harry M. T., et el. (2018) Multidimensional quantitative analysis of mRNA expression within intact vertebrate embryos ; Development; Vol. 145; No. 1; Art. No. 156869; PMCID PMC5825878; 10.1242/dev.156869
Ojosnegros, Samuel and Cutrale, Francesco, et el. (2017) Eph-ephrin signaling modulated by polymerization and condensation of receptors ; Proceedings of the National Academy of Sciences of the United States of America; Vol. 114; No. 50; 13188-13193; PMCID PMC5740673; 10.1073/pnas.1713564114
Lee, Daniel A. and Andreev, Andrey, et el. (2017) Genetic and neuronal regulation of sleep by neuropeptide VF ; eLife; Vol. 6; Art. No. e25727; PMCID PMC5705210; 10.7554/eLife.25727
Rajagopal, A. and Yurk, D., et el. (2017) Multiplexing Method for Significantly Increasing the Bandwidth of qPCR Instrumentation ; Journal of Molecular Diagnostics; Vol. 19; No. 6; 1046-1047; 10.1016/S1525-1578(17)30482-8
Bower, Danielle V. and Lansdale, Nick, et el. (2017) SERCA directs cell migration and branching across species and germ layers ; Biology Open; Vol. 6; No. 10; 1458-1471; PMCID PMC5665464; 10.1242/bio.026039
Cutrale, Francesco and Trivedi, Vikas, et el. (2017) Hyperspectral phasor analysis enables multiplexed 5D in vivo imaging ; Nature Methods; Vol. 14; No. 2; 149-152; 10.1038/nmeth.4134
Cutrale, F. and Trivedi, Vikas, et el. (2016) Live 5D hyper-spectral fluorescence imaging of developing zebrafish ; Molecular Biology of the Cell; Vol. 27; Art. No. P68
Choi, Harry M. T. and Calvert, Colby R., et el. (2016) Mapping a multiplexed zoo of mRNA expression ; Development; Vol. 143; No. 19; 3632-3637; PMCID PMC5087610; 10.1242/dev.140137
Santos, Rosaysela and Kawauchi, Shimako, et el. (2016) Conditional Creation and Rescue of Nipbl-Deficiency in Mice Reveals Multiple Determinants of Risk for Congenital Heart Defects ; PLoS Biology; Vol. 14; No. 9; Art. No. e2000197; PMCID PMC5016002; 10.1371/journal.pbio.2000197
Ndjamen, Blaise and Joshi, Devashish S., et el. (2016) Characterization of Antibody Bipolar Bridging Mediated by the Human Cytomegalovirus Fc receptor gp68 ; Journal of Virology; Vol. 90; No. 6; 3262-3567; PMCID PMC4810659; 10.1128/JVI.02855-15
Armani, Andrea M. and Alabi, Akinleye C., et el. (2015) Click chemistry surface functionalization for resonant micro-cavity sensors
Huss, David and Benazeraf, Bertrand, et el. (2015) A transgenic quail model that enables dynamic imaging of amniote embryogenesis ; Development; Vol. 142; No. 16; 2850-2859; PMCID PMC4550965; 10.1242/dev.121392
Ruf-Zamojski, Frederique and Trivedi, Vikas, et el. (2015) Spatio-Temporal Differences in Dystrophin Dynamics at mRNA and Protein Levels Revealed by a Novel FlipTrap Line ; PLoS ONE; Vol. 10; No. 6; Art. No. e0128944; PMCID PMC4471274; 10.1371/journal.pone.0128944
Trivedi, Vikas and Truong, Thai V., et el. (2015) Dynamic structure and protein expression of the live embryonic heart captured by 2-photon light sheet microscopy and retrospective registration ; Biomedical Optics Express; Vol. 6; No. 6; 2056-2066; PMCID PMC4473743; 10.1364/BOE.6.002056
Li, Yuwei and Trivedi, Vikas, et el. (2015) Dynamic imaging of the growth plate cartilage reveals multiple contributors to skeletal morphogenesis ; FASEB Journal; Vol. 29; No. 1 S; LB37
Li, Yuwei and Trivedi, Vikas, et el. (2015) Dynamic imaging of the growth plate cartilage reveals multiple contributors to skeletal morphogenesis ; Nature Communications; Vol. 6; No. 4; Art. No. 6798; PMCID PMC4403347; 10.1038/ncomms7798
Huss, David and Choi, Harry M. T., et el. (2015) Combinatorial Analysis of mRNA Expression Patterns in Mouse Embryos Using Hybridization Chain Reaction ; Cold Spring Harbor Protocols; Vol. 2015; No. 3; 259-268; 10.1101/pdb.prot083832
Ndjamen, B. and Fraser, S. E., et el. (2014) Distinct Intracellular Trafficking Patterns of Host IgG by Herpes Virus Fc-Receptors
Bower, Danielle V. and Lee, Hyung-Kook (Peter), et el. (2014) Airway branching has conserved needs for local parasympathetic innervation but not neurotransmission ; BMC Biology; Vol. 12; Art. No. 92; PMCID PMC4255442; 10.1186/s12915-014-0092-2
Ndjamen, Blaise and Farley, Alexander H., et el. (2014) The Herpes Virus Fc Receptor gE-gI Mediates Antibody Bipolar Bridging to Clear Viral Antigens from the Cell Surface ; PLoS Pathogens; Vol. 10; No. 3; Art. No. e1003961; PMCID PMC3946383; 10.1371/journal.ppat.1003961
Chandrashekran, Anil and Sarkar, Rupa, et el. (2014) Efficient generation of transgenic mice by lentivirus-mediated modification of spermatozoa ; FASEB Journal; Vol. 28; No. 2; 569-579; 10.1096/fj.13-233999
Truong, Thai V. and Trivedi, Vikas, et el. (2014) Live 4D Imaging of the Embryonic Vertebrate Heart with Two-Photon Light Sheet Microscopy and Simultaneous Optical Phase Stamping ; Biophysical Journal; Vol. 106; No. 2; 435A-436A; 10.1016/j.bpj.2013.11.2453
Cutrale, Francesco and Trivedi, Vikas, et el. (2014) A Spectral Phasor Perspective in Zebrafish Muscle Development ; Biophysical Journal; Vol. 106; No. 2; 796A; 10.1016/j.bpj.2013.11.4367
Trivedi, Vikas and Li, Yuwei, et el. (2014) How Embryonic Cartilage Grows: Insights Gained from Quantitative Live Imaging ; Biophysical Journal; Vol. 106; No. 2; 575A; 10.1016/j.bpj.2013.11.3188
Schwartz, Daniel M. and Fingler, Jeff, et el. (2014) Phase-Variance Optical Coherence Tomography - A Technique for Noninvasive Angiography ; Ophtalmology; Vol. 121; No. 1; 180-187; PMCID PMC4190463; 10.1016/j.ophtha.2013.09.002
Borges, R. M. and Horne, J. H., et el. (2013) A detailed description of an economical setup for electroporation of chick embryos in ovo ; Brazilian Journal of Medical and Biological Research; Vol. 46; No. 9; 752-757; PMCID PMC3854436
Kim, Dae Yu and Fingler, Jeff, et el. (2013) Optical imaging of the chorioretinal vasculature in the living human eye ; Proceedings of the National Academy of Sciences of the United States of America; Vol. 110; No. 35; 14354-14359; PMCID PMC3761584; 10.1073/pnas.1307315110
Trinh, Le A. and Fraser, Scott E. (2013) Enhancer and gene traps for molecular imaging and genetic analysis in zebrafish ; Development, Growth & Differentiation; Vol. 55; No. 4; 434-445; 10.1111/dgd.12055
Ndjamen, Blaise and Farley, Alexander, et el. (2013) Intracellular Trafficking of an Antibody Bipolar Bridged Complex of HSV-1 gE-gI, IgG, and a Viral Antigen ; FASEB Journal; Vol. 27; Art. No. 767.3
Kim, Dae Yu and Fingler, Jeff, et el. (2013) Visualization of human retinal and choroidal vascular networks with phase-variance optical coherence tomography ; ISBN 978-0-8194-9336-1; Ophthalmic Technologies XXIII; Art. No. 856702; 10.1117/12.2004606
Palanca, Ana Marie S. and Lee, Sung-Ling, et el. (2013) New transgenic reporters identify somatosensory neuron subtypes in larval zebrafish ; Developmental Neurobiology; Vol. 73; No. 2; 152-167; PMCID PMC3541445; 10.1002/dneu.22049
Trivedi, Vikas and Truong, Thai V., et el. (2013) Dynamic Three-Dimensional Imaging of Cellular Shape Changes and Protein Expression in the Developing Zebrafish Heart ; Biophysical Journal; Vol. 104; No. 2; 202A; 10.1016/j.bpj.2012.11.1140
Truong, Thai V. and Holland, Daniel B., et el. (2013) Imaging Proteins, Cells, and Tissues Dynamics during Embryogenesis with Two-Photon Light-Sheet Microscopy ; Biophysical Journal; Vol. 104; No. 2; 337A; 10.1016/j.bpj.2012.11.1872
Su, Judith and Goldberg, Alex, et el. (2013) Frequency Locked Microtoroid Optical Resonators as a Non-Invasive Tumor Biopsy Alternative ; Biophysical Journal; Vol. 104; No. 2; 528A; 10.1016/j.bpj.2012.11.2924
Seidl, Armin H. and Sanchez, Jason Tait, et el. (2013) Transgenic quail as a model for research in the avian nervous system: A comparative study of the auditory brainstem ; Journal of Comparative Neurology; Vol. 521; No. 1; 5-23; 10.1002/cne.23187
Armani, Andrea M. and Su, Tsu-Te J., et el. (2012) Micro-cavity gas and vapor sensors and detection methods
Liu, Cambrian Y. and Xiao, Cheng, et el. (2012) Electrophysiological characterization of Grueneberg ganglion olfactory neurons: spontaneous firing, sodium conductance, and hyperpolarization-activated currents ; Journal of Neurophysiology; Vol. 108; No. 5; 1318-1334; 10.1152/jn.00907.2011
Čulić-Viskota, Jelena and Dempsey, William P., et el. (2012) Surface functionalization of barium titanate SHG nanoprobes for in vivo imaging in zebrafish ; Nature Protocols; Vol. 7; No. 9; 1618-1633; 10.1038/nprot.2012.087
Liu, Cambrian Y. and Xiao, Cheng, et el. (2012) Electrophysiological characterization of Grueneberg ganglion olfactory neurons: spontaneous firing, sodium conductance, and
hyperpolarization-activated currents ; Journal of Neurophysiology; Vol. 108; No. 5; 1318-1334; PMCID PMC3544954
Dempsey, William P. and Fraser, Scott E., et el. (2012) SHG nanoprobes: Advancing harmonic imaging in biology ; Bioessays; Vol. 34; No. 5; 351-360; 10.1002/bies.201100106
Motaghiannezam, Reza and Schwartz, Daniel M., et el. (2012) In Vivo Human Choroidal Vascular Pattern Visualization Using High-Speed Swept-Source Optical Coherence Tomography at 1060 nm ; Investigative Ophthalmology and Visual Science; Vol. 53; No. 4; 2337-2348; 10.1167/iovs.11-7823
Dempsey, William P. and Fraser, Scott E., et el. (2012) PhOTO Zebrafish: A Transgenic Resource for In Vivo Lineage Tracing during Development and Regeneration ; PLoS ONE; Vol. 7; No. 3; Art. No. e32888; PMCID PMC3303793; 10.1371/journal.pone.0032888
Motaghiannezam, Reza and Fraser, Scott (2012) Differential intensity contrast swept source optical coherence tomography for human retinal vasculature visualization ; ISBN 9780819488527; Ophthalmic technologies XXII : 21-22 January 20-12, San Francisco, California, United States; Art. No. 82090O; 10.1117/12.907149
Motaghiannezam, Reza and Fraser, Scott (2012) Logarithmic intensity and speckle-based motion contrast methods for human retinal vasculature visualization using swept source optical coherence tomography ; Biomedical Optics Express; Vol. 3; No. 3; 503-521; 10.1364/BOE.3.000503
Kim, Dae Yu and Fingler, Jeff, et el. (2012) Visualization of human retinal capillary networks: a comparison of intensity, speckle-variance and phase-variance optical coherence tomography ; ISBN 978-0-8194-8856-5; Optical Coherence Tomography and Coherence Domain Optical Methods in Biomedicine XVI; Art. No. 821307; 10.1117/12.906940
Motaghiannezam, S. M. Reza and Koos, David, et el. (2012) Differential phase-contrast, swept-source optical coherence tomography at 1060 nm for in vivo human retinal and choroidal vasculature visualization ; Journal of Biomedical Optics; Vol. 17; No. 2; Art. No. 026011; 10.1117/1.JBO.17.2.026011
Armani, Andrea M. and Su, Tsu-Te J., et el. (2012) Micro-cavity gas and vapor sensors and detection methods
Motaghiannezam, Reza and Fraser, Scott (2012) In vivo human retinal and choroidal vasculature visualization using differential phase contrast swept source optical coherence tomography at 1060 nm ; ISBN 9780819488565; Optical coherence tomography and coherence domain optical methods in biomedicine XVI : 23-25 January 2012, San Francisco, California, United States; Art. No. 821304; 10.1117/12.910991
Armani, Andrea M. and Alabi, Akinleye C., et el. (2012) Click chemistry surface functionalization for resonant micro-cavity sensors
Kim, Dae Yu and Fingler, Jeff, et el. (2012) Noninvasive Imaging of the Foveal Avascular Zone with High-Speed, Phase-Variance Optical Coherence Tomography ; Investigative Ophthalmology and Visual Science; Vol. 53; No. 1; 85-92; PMCID PMC3292386; 10.1167/iovs.11-8249
Trihn, Le A. and Hochgreb, Tatiana, et el. (2011) A versatile gene trap to visualize and interrogate the function of the vertebrate proteome ; Genes and Development; Vol. 25; No. 21; 2306-2320; PMCID PMC3219234; 10.1101/gad.174037.111
Truong, Thai V. and Supatto, Willy, et el. (2011) Deep and fast live imaging with two-photon scanned light-sheet microscopy ; Nature Methods; Vol. 8; No. 9; 757-760; 10.1038/nmeth.1652
Cooley, James and Whitaker, Stacia, et el. (2011) Cytoskeletal polarity mediates localized induction of the heart progenitor lineage ; Nature Cell Biology; Vol. 13; No. 8; 952-957; 10.1038/ncb2291
Wu, Zhanhong and Todorov, Ivan, et el. (2011) In Vivo Imaging of Transplanted Islets with ^(64)Cu-DO3A-VS-Cys^(40)-Exendin-4 by Targeting GLP-1 Receptor ; Bioconjugate Chemistry; Vol. 22; No. 8; 1587-1594; 10.1021/bc200132t
Hochheiser, Harry and Aronow, Bruce J., et el. (2011) The FaceBase Consortium: A comprehensive program to facilitate craniofacial research ; Developmental Biology; Vol. 355; No. 2; 175-182; PMCID PMC3440302; 10.1016/j.ydbio.2011.02.033
Amit, Roee and Garcia, Hernan G., et el. (2011) Building Enhancers from the Ground Up: A Synthetic Biology Approach ; Cell; Vol. 146; No. 1; 105-118; PMCID PMC3155781; 10.1016/j.cell.2011.06.024
Ohn, Jungho and Yang, Jennifer, et el. (2011) High-speed multicolor microscopy of repeating dynamic processes ; Genesis; Vol. 49; No. 7; 514-521; PMCID PMC3344748; 10.1002/dvg.20774
Kim, Dae Yu and Fingler, Jeff, et el. (2011) In vivo volumetric imaging of human retinal circulation with phase-variance optical coherence tomography ; Biomedical Optics Express; Vol. 2; No. 6; 1504-1513; PMCID PMC3114219; 10.1364/BOE.2.001504
Caneparo, Luca and Pantazis, Periklis, et el. (2011) Intercellular Bridges in Vertebrate Gastrulation ; PLoS ONE; Vol. 6; No. 5; Art. No. e20230; PMCID PMC3102083; 10.1371/journal.pone.0020230
Lu, Tao and Lee, Hansuek, et el. (2011) High sensitivity nanoparticle detection using optical microcavities ; Proceedings of the National Academy of Sciences of the United States of America; Vol. 108; No. 15; 5976-5979; PMCID PMC3076881; 10.1073/pnas.1017962108
Wu, David and Freund, Jonathan B., et el. (2011) Mechanistic Basis of Otolith Formation during Teleost Inner Ear Development ; Developmental Cell; Vol. 20; No. 2; 271-278; PMCID PMC4556435; 10.1016/j.devcel.2010.12.006
Kim, Dae Yu and Fingler, Jeff, et el. (2011) Visualization of human retinal micro-capillaries with phase contrast high-speed optical coherence tomography ; ISBN 978-0-81948-426-0; Optical Coherence Tomography and Coherence Domain Optical Methods in Biomedicine XV; Art. No. 78890H; 10.1117/12.873896
Fingler, Jeff and Schwartz, Daniel M., et el. (2011) Extended volume retinal vascular imaging with phase variance contrast optical coherence tomography ; ISBN 978-0-8194-8422-2; Ophthalmic Technologies XXI; Art. No. 78850I; 10.1117/12.873893
Plachta, Nicolas and Bollenbach, Tobias, et el. (2011) Oct4 kinetics predict cell lineage patterning in the early mammalian embryo ; Nature Cell Biology; Vol. 13; No. 2; 117-123; 10.1038/ncb2154
Ezin, Akouavi M. and Sechrist, John W., et el. (2011) Early regulative ability of the neuroepithelium to form cardiac neural crest ; Developmental Biology; Vol. 349; No. 2; 238-249; PMCID PMC3018664; 10.1016/j.ydbio.2010.10.032
Žigman, Mihaela and Trinh, Le A., et el. (2011) Zebrafish Neural Tube Morphogenesis Requires Scribble-Dependent Oriented Cell Divisions ; Current Biology; Vol. 21; No. 1; 79-86; PMCID PMC4308621; 10.1016/j.cub.2010.12.005
Kulesa, Paul M. and Fraser, Scott E. (2011) Live imaging of avian embryos ; ISBN 978-0-87969-940-6; Imaging in Developmental Biology: a laboratory maniual; 85-99
Kasemeier-Kulesa, Jennifer C. and Lefcort, Frances, et el. (2011) Imaging Cell Migration in Chick Explant Cultures ; ISBN 978-0-87969-940-6; Imaging in Developmental Biology: a laboratory manual; 291-298
Quesada-Hernández, Elena and Caneparo, Luca, et el. (2010) Stereotypical Cell Division Orientation Controls Neural Rod Midline Formation in Zebrafish ; Current Biology; Vol. 20; No. 21; 1966-1972; 10.1016/j.cub.2010.10.009
Choi, Harry M. T. and Chang, Joann Y., et el. (2010) Programmable in situ amplification for multiplexed imaging of mRNA expression ; Nature Biotechnology; Vol. 28; No. 11; 1208-1212; PMCID PMC3058322; 10.1038/nbt.1692
Sato, Yuki and Poynter, Greg, et el. (2010) Dynamic Analysis of Vascular Morphogenesis Using Transgenic Quail Embryos ; PLoS ONE; Vol. 5; No. 9; Art. No. e12674; PMCID PMC2939056; 10.1371/journal.pone.0012674
Jerdeva, Galina V. and Tesar, Devin B., et el. (2010) Comparison of FcRn- and pIgR-Mediated Transport in MDCK Cells by Fluorescence Confocal Microscopy ; Traffic; Vol. 11; No. 9; 1205-1220; PMCID PMC2975666; 10.1111/j.1600-0854.2010.01083.x
Pantazis, Periklis and Maloney, James, et el. (2010) Second harmonic generating (SHG) nanoprobes for in vivo imaging ; Proceedings of the National Academy of Sciences of the United States of America; Vol. 107; No. 33; 14535-14540; PMCID PMC2930484; 10.1073/pnas.1004748107
Pikov, Victor and Arakaki, Xianghong, et el. (2010) Modulation of neuronal activity and plasma membrane properties with low-power millimeter waves in organotypic cortical slices ; Journal of Neural Engineering; Vol. 7; No. 4; Art. No. 045003; 10.1088/1741-2560/7/4/045003
Kulesa, P. M. and Bailey, C. M., et el. (2010) In Ovo Live Imaging of Avian Embryos ; Cold Spring Harbor Protocols; Vol. 2010; No. 6; Art. No. 5446; PMCID PMC3491899; 10.1101/pdb.prot5446
Fingler, Jeff and Zawadzki, Robert J., et el. (2009) Volumetric microvascular imaging of human retina using optical coherence tomography with a novel motion contrast technique ; Optics Express; Vol. 17; No. 24; 22190-22200; PMCID PMC2791341; 10.1364/OE.17.022190
Vermot, Julien and Forouhar, Arian S., et el. (2009) Reversing Blood Flows Act through klf2a to Ensure Normal Valvulogenesis in the Developing Heart ; PLoS Biology; Vol. 7; No. 11; Art. No. e1000246; PMCID PMC2773122; 10.1371/journal.pbio.1000246
Liu, Cambrian Y. and Fraser, Scott E., et el. (2009) Grueneberg ganglion olfactory subsystem employs a cGMP signaling pathway ; Journal of Comparative Neurology; Vol. 516; No. 1; 36-48; PMCID PMC4314211; 10.1002/cne.22096
Supatto, Willy and McMahon, Amy, et el. (2009) Quantitative imaging of collective cell migration during Drosophila gastrulation: multiphoton microscopy and computational analysis ; Nature Protocols; Vol. 4; No. 10; 1397-1412; PMCID PMC2854020; 10.1038/nprot.2009.130
Demyanenko, Andrey V. and Zhao, Lin, et el. (2009) A uniplanar three-axis gradient set for in vivo magnetic resonance microscopy ; Journal of Magnetic Resonance; Vol. 200; No. 1; 38-48; 10.1016/j.jmr.2009.05.014
Wu, David and Ghosh, Kingshuk, et el. (2009) Trajectory Approach to Two-State Kinetics of Single Particles on Sculpted Energy Landscapes ; Physical Review Letters; Vol. 103; No. 5; Art. No. 050603; PMCID PMC3273425; 10.1103/PhysRevLett.103.050603
Ezin, Akouavi M. and Fraser, Scott E., et el. (2009) Fate map and morphogenesis of presumptive neural crest and dorsal neural tube ; Developmental Biology; Vol. 330; No. 2; 221-236; PMCID PMC2717095; 10.1016/j.ydbio.2009.03.018
Supatto, Willy and McMahon, Amy, et el. (2009) Quantitative imaging of the collective cell movements shaping an embryo ; ISBN 978-1-4244-2940-0; 42nd Asilomar Conference on Signals, Systems and Computers; 61-63; 10.1109/ACSSC.2008.5074361
Supatto, Willy and Fraser, Scott E., et el. (2009) Probing cilia-driven flow in living embryos using femtosecond laser ablation and fast imaging ; ISBN 978-0-8194-7449-0; Commercial and biomedical applications of ultrafast lasers IX; 10.1117/12.808330
Pantazis, Periklis and Pu, Ye, et el. (2009) Second harmonic generating (SHG) nanoprobes: a new tool for biomedical imaging ; ISBN 9780819474292; Multiphoton microscopy in the biomedical sciences IX; Art. No. 71831P; 10.1117/12.808434
Reeves, Gregory T. and Fraser, Scott E. (2009) Biological Systems from an Engineer's Point of View ; PLoS Biology; Vol. 7; No. 1; e1000021; PMCID PMC2628404; 10.1371/journal.pbio.1000021
Colantonio, Jessica R. and Vermot, Julien, et el. (2009) The dynein regulatory complex is required for ciliary motility and otolith biogenesis in the inner ear ; Nature; Vol. 457; No. 7226; 205-209; PMCID PMC3821763; 10.1038/nature07520
Kulkarni, Rajan P. and Fraser, Scott E., et el. (2008) Characterization of high-Q optical microcavities using confocal microscopy ; Optics Letters; Vol. 33; No. 24; 2931-2933; 10.1364/OL.33.002931
McMahon, Amy and Supatto, Willy, et el. (2008) Dynamic Analyses of Drosophila Gastrulation Provide Insights into Collective Cell Migration ; Science; Vol. 322; No. 5907; 1546-1550; PMCID PMC2801059; 10.1126/science.1167094
Fingler, Jeff and Readhead, Carol, et el. (2008) Phase-Contrast OCT Imaging of Transverse Flows in the Mouse Retina and Choroid ; Investigative Ophthalmology and Visual Science; Vol. 49; No. 11; 5055-5059; 10.1167/iovs.07-1627
Supatto, Willy and Fraser, Scott E., et el. (2008) An all-optical approach for probing microscopic flows in living embryos ; Biophysical Journal; Vol. 95; No. 4; L29-L31; 10.1529/biophysj.108.137786
Lin, Alexander P. and Bennett, Eric, et el. (2008) Circumferential strain in the wall of the common carotid artery: Comparing displacement-encoded and cine MRI in volunteers ; Magnetic Resonance in Medicine; Vol. 60; No. 1; 8-13; PMCID PMC2886512; 10.1002/mrm.21621
Vermot, Julien and Fraser, Scott E., et el. (2008) Fast fluorescence microscopy for imaging the dynamics of embryonic development ; HFSP Journal; Vol. 2; No. 3; 143-155; PMCID PMC2645566; 10.2976/1.2907579
Armani, Andrea M. and Fraser, Scott E. (2008) Label-free detection of cytokines using optical microcavities ; ISBN 9780819470379; Single Molecule Spectroscopy and Imaging; Art. No. 68620C; 10.1117/12.761002
Armani, Andrea M. and Fraser, Scott E., et el. (2008) Label-free single-molecule all-optical sensor ; ISBN 9780819470270; Optical Fibers and Sensors for Medical Diagnostics and Treatment Applications VIII; Art. No. 68520A; 10.1117/12.761007
Lu, Jian and Pereira, Francisco, et el. (2008) Three-dimensional real-time imaging of cardiac cell motions in living embryos ; Journal of Biomedical Optics; Vol. 13; No. 1; Art. No. 014006; 10.1117/1.2830824
Bhattacharyya, Sujata and Kulesa, Paul M., et el. (2008) Vital labeling of embryonic cells using fluorescent dyes and proteins ; ISBN 978-0-12-564174-6; Avian Embryology, 2nd Edition; 187-210; 10.1016/S0091-679X(08)00210-0
Armani, Andrea M. and Fraser, Scott E., et el. (2007) Label-free, single molecule detection of cytokines using optical microcavities ; ISBN 978-1-4244-0924-2; 2007 IEEE LEOS Annual Meeting Conference Proceedings; 596-597; 10.1109/LEOS.2007.4382547
Fingler, Jeff and Schwartz, Dan, et el. (2007) Mobility and transverse flow visualization using phase variance contrast with spectral domain optical coherence tomography ; Optics Express; Vol. 15; No. 20; 12636-12653
Lucitti, Jennifer L. and Jones, Elizabeth A. V., et el. (2007) Vascular remodeling of the mouse yolk sac requires hemodynamic force ; Development; Vol. 134; No. 18; 3317-3326; 10.1242/10.1242/dev.02883
Megason, Sean G. and Fraser, Scott E. (2007) Imaging in Systems Biology ; Cell; Vol. 130; No. 5; 784-795; 10.1016/j.cell.2007.08.031
Armani, Andrea M. and Kulkarni, Rajan P., et el. (2007) Label-Free, Single-Molecule Detection with Optical Microcavities ; Science; Vol. 317; No. 5839; 783-787; 10.1126/science.1145002
Trinh, Le A. and McCutchen, Marshall, et el. (2007) Fluorescent in situ hybridization employing the conventional NBT/BCIP chromogenic stain ; BioTechniques; Vol. 42; No. 6; 756-759; 10.2144/000112476
Ruffins, Seth W. and Martin, Melanie, et el. (2007) Digital Three-Dimensional Atlas of Quail Development Using High-Resolution MRI ; TheScientificWorld; Vol. 7; 592-604; 10.1100/tsw.2007.125
Papan, Cyrus and Boulat, Benoit, et el. (2007) Formation of the dorsal marginal zone in Xenopus laevis analyzed by time-lapse microscopic magnetic resonance imaging ; Developmental Biology; Vol. 305; No. 1; 161-171; 10.1016/j.ydbio.2007.02.005
Fingler, J. and Williams, J., et el. (2007) Imaging vasculature independent of direction of flow using spectral domain optical coherence tomography ; ISBN 9780819465429; Coherence Domain Optical Methods and Optical Coherence Tomography in Biomedicine XI; Art. No. 64290P; 10.1117/12.697231
Hoeling, Barbara M. and Feldman, Stephanie S., et el. (2007) Motion-sensitive 3-D optical coherence microscope operating at 1300 nm for the visualization of early frog development ; ISBN 9780819465429; Coherence Domain Optical Methods and Optical Coherence Tomography in Biomedicine XI; Art. No. 64292T; 10.1117/12.701420
Martin, Melanie and Reyes, Samuel D., et el. (2007) T_2-weighted μMRI and Evoked Potential of the Visual System Measurements During the Development of Hypomyelinated Transgenic Mice ; Neurochemical Research; Vol. 32; No. 2; 159-165; 10.1007/s11064-006-9121-z
Papan, Cyrus and Boulat, Benoit, et el. (2007) Two-Dimensional and Three-Dimensional Time-Lapse Microscopic Magnetic Resonance Imaging of Xenopus Gastrulation Movements Using Intrinsic Tissue-Specific Contrast ; Developmental Dynamics; Vol. 236; No. 2; 494-501; 10.1002/dvdy.21045
Kulkarni, Rajan P. and Bak-Maier, Magdalena, et el. (2007) Differences in protein mobility between pioneer versus follower growth cones ; Proceedings of the National Academy of Sciences of the United States of America; Vol. 104; No. 4; 1207-1212; PMCID PMC1783102; 10.1073/pnas.0610142104
Arlett, J. L. and Paul, M. R., et el. (2007) BioNEMS: Nanomechanical systems for single-molecule biophysics ; ISBN 978-3-540-49521-5; Controlled nanoscale motion Nobel Symposium 131; 241-270; 10.1007/3-540-49522-3_12
Martin, Melanie and Hiltner, Timothy D., et el. (2006) Myelin deficiencies visualized in vivo: Visually evoked potentials and T2-weighted magnetic resonance images of shiverer mutant and wild-type mice ; Journal of Neuroscience Research; Vol. 84; No. 8; 1716-1726; 10.1002/jnr.21086
Damle, Sagar and Hanser, Bridget, et el. (2006) Confocal quantification of cis-regulatory reporter gene expression in living sea urchin ; Developmental Biology; Vol. 299; No. 2; 543-550; 10.1016/j.ydbio.2006.06.016
Papan, Cyrus and Boulat, Benoit, et el. (2006) Time-lapse tracing of mitotic cell divisions in the early Xenopus embryo using microscopic MRI ; Developmental Dynamics; Vol. 235; No. 11; 3059-3062; 10.1002/dvdy.20947
Liebling, Michael and Forouhar, Arian S., et el. (2006) Rapid three-dimensional imaging and analysis of the beating embryonic heart reveals functional changes during development ; Developmental Dynamics; Vol. 235; No. 11; 2940-2948; 10.1002/dvdy.20926
Köster, Reinhard W. and Fraser, Scott E. (2006) FGF Signaling Mediates Regeneration of the Differentiating Cerebellum through Repatterning of the Anterior Hindbrain and Reinitiation of Neuronal Migration ; Journal of Neuroscience; Vol. 26; No. 27; 7293-7304; PMCID PMC6673949; 10.1523/JNEUROSCI.0095-06.2006
Forouhar, Arian S. and Liebling, Michael, et el. (2006) The Embryonic Vertebrate Heart Tube Is a Dynamic Suction Pump ; Science; Vol. 312; No. 5774; 751-753; 10.1126/science.1123775
Wang, Jianbo and Hamblet, Natasha S., et el. (2006) Dishevelled genes mediate a conserved mammalian PCP pathway to regulate convergent extension during neurulation ; Development; Vol. 133; No. 9; 1767-1778; PMCID PMC4158842; 10.1242/dev.02347
Kulkarni, Rajan P. and Castelino, Kenneth, et el. (2006) Intracellular Transport Dynamics of Endosomes Containing DNA Polyplexes along the Microtubule Network ; Biophysical Journal; Vol. 90; No. 5; L42-L44; PMCID PMC1367335; 10.1529/biophysj.105.077941
Fingler, Jeff and Williams, Jon, et el. (2006) Transverse priority phase sensitive optical coherence tomography ; ISBN 0819461210; Coherence Domain Optical Methods and Optical Coherence Tomography in Biomedicine X; Art. No. 607922; 10.1117/12.648997
Canaria, Christie A. and So, Jonathan, et el. (2006) Formation and removal of alkylthiolate self-assembled monolayers on gold in aqueous solutions ; Lab on a Chip; Vol. 6; No. 2; 289-295; 10.1039/b510661c
Liebling, Michael and Vermot, Julien, et el. (2006) Nonuniform temporal alignment of slice sequences for four-dimensional imaging of cyclically deforming embryonic structures ; ISBN 978-0-7803-9576-3; 2006 3rd IEEE International Symposium on Biomedical Imaging: Macro to Nano; 1156-1159; 10.1109/ISBI.2006.1625128
Tyszka, J. Michael and Ewald, Andrew J., et el. (2005) New tools for visualization and analysis of morphogenesis in spherical embryos ; Developmental Dynamics; Vol. 234; No. 4; 974-983; 10.1002/dvdy.20561
Koos, David S. and Fraser, Scott E. (2005) The Grueneberg ganglion projects to the olfactory bulb ; Neuroreport; Vol. 16; No. 17; 1929-1932; 10.1097/01.wnr.0000186597.72081.10
Rieger, Sandra and Kulkarni, Rajan P., et el. (2005) Quantum Dots Are Powerful Multipurpose Vital Labeling Agents in Zebrafish Embryos ; Developmental Dynamics; Vol. 234; No. 3; 670-681; 10.1002/dvdy.20524
Kulesa, Paul M. and Lu, Carole C., et el. (2005) Time-Lapse Analysis Reveals a Series of Events by Which Cranial Neural Crest Cells Reroute around Physical Barriers ; Brain, Behavior and Evolution; Vol. 66; No. 4; 255-265; 10.1159/000088129
Liebling, Michael and Forouhar, Arian S., et el. (2005) Four-dimensional cardiac imaging in living embryos via postacquisition synchronization of nongated slice sequences ; Journal of Biomedical Optics; Vol. 10; No. 5; Art. No. 054001; 10.1117/1.2061567
Wade, Lawrence A. and Collier, C. Patrick, et el. (2005) Single-Biomolecule Resolution Imaging with an Optical Microscope ; Microscopy and Microanalysis; Vol. 11; No. S2; 146-147; 10.1017/S1431927605509905
Kulkarni, Rajan P. and Mishra, Swaroop, et el. (2005) Single Cell Kinetics of Intracellular, Nonviral, Nucleic Acid Delivery Vehicle Acidification and Trafficking ; Bioconjugate Chemistry; Vol. 16; No. 4; 986-994; 10.1021/bc050081u
Kulkarni, Rajan P. and Wu, David D., et el. (2005) Quantitating intracellular transport of polyplexes by spatio-temporal image correlation spectroscopy ; Proceedings of the National Academy of Sciences of the United States of America; Vol. 102; No. 21; 7523-7528; PMCID PMC1140437; 10.1073/pnas.0501950102
Tyszka, J. Michael and Fraser, Scott E., et el. (2005) Magnetic resonance microscopy: recent advances and applications ; Current Opinion in Biotechnology; Vol. 16; No. 1; 93-99; 10.1016/j.copbio.2004.11.004
Jones, Elizabeth A. V. and Baron, Margaret H., et el. (2005) Dynamic In Vivo Imaging of Mammalian Hematovascular Development Using Whole Embryo Culture ; ISBN 978-1-58829-296-4; Developmental Hematopoiesis: Methods and Protocols; 381-394; 10.1385/1-59259-826-9:381
Ewald, Andrew J. and Peyrot, Sara M., et el. (2004) Regional requirements for Dishevelled signaling during Xenopus gastrulation: separable effects on blastopore closure, mesendoderm internalization and archenteron formation ; Development; Vol. 131; No. 24; 6195-6209; 10.1242/dev.01542
Jones, E. A. V. and Baron, M. H., et el. (2004) Measuring hemodynamic changes during mammalian development ; American Journal of Physiology - Heart and Circulatory Physiology; Vol. 287; No. 4; H1561-H1569; 10.1152/ajpheart.00081.2004
Haskell, R. C. and Williams, M. E., et el. (2004) Visualizing Early Frog Development with Motion-Sensitive 3-D Optical Coherence Microscopy ; ISBN 0-7803-8439-3; EMBC 2004 : 26th Annual International Conference of the IEEE Engineering in Medicine and Biology Society; 5296-5299; 10.1109/IEMBS.2004.1404479
Gong, Ying and Mo, Chunhui, et el. (2004) Planar cell polarity signalling controls cell division orientation during zebrafish gastrulation ; Nature; Vol. 430; No. 7000; 689-693; 10.1038/nature02796
Dorman, Jennie B. and James, Karen E., et el. (2004) bullwinkle is required for epithelial morphogenesis during Drosophila oogenesis ; Developmental Biology; Vol. 267; No. 2; 320-341; 10.1016/j.ydbio.2003.10.020
Modo, Michel and Mellodew, Karen, et el. (2004) Mapping transplanted stem cell migration after a stroke: a serial, in vivo magnetic resonance imaging study ; NeuroImage; Vol. 21; No. 1; 311-317; 10.1016/j.neuroimage.2003.08.030
Köster, Reinhard W. and Fraser, Scott E. (2004) Time-Lapse Microscopy of Brain Development ; ISBN 9780125641715; The Zebrafish: Cellular and Developmental Biology; 207-235; 10.1016/S0091-679X(04)76011-2
Nashmi, Raad and Dickinson, Mary E., et el. (2003) Assembly of α4β2 Nicotinic Acetylcholine Receptors Assessed with Functional Fluorescently Labeled Subunits: Effects of Localization, Trafficking, and Nicotine-Induced Upregulation in Clonal Mammalian Cells and in Cultured Midbrain Neurons ; Journal of Neuroscience; Vol. 23; No. 37; 11554-11567; PMCID PMC6740951; 10.1523/jneurosci.23-37-11554.2003
Fraser, Scott E. (2003) Crystal gazing in optical microscopy ; Nature Biotechnology; Vol. 21; No. 11; 1272-1273; 10.1038/nbt1103-1272
Megason, Sean G. and Fraser, Scott E. (2003) Digitizing life at the level of the cell: high-performance laser-scanning microscopy and image analysis for in toto imaging of development ; Mechanisms of Development; Vol. 120; No. 11; 1407-1420; 10.1016/j.mod.2003.07.005
Bak-Maier, Magdalena and Fraser, Scott E. (2003) Axon fasciculation and differences in midline kinetics between pioneer and follower axons within commissural fascicles ; Development; Vol. 130; No. 20; 4999-5008; 10.1242/10.1242/dev.00713
Patten, Iain and Kulesa, Paul, et el. (2003) Distinct modes of floor plate induction in the chick embryo ; Development; Vol. 130; No. 20; 4809-4821; 10.1242/dev.00694
Hadjantonakis, Anna-Katerina and Dickinson, Mary E., et el. (2003) Technicolour transgenics: Imaging tools for functional genomics in the mouse ; Nature Reviews. Genetics; Vol. 4; No. 8; 613-625; 10.1038/nrg1126
Pautler, Robia G. and Fraser, Scott E. (2003) The year(s) of the contrast agent – micro-MRI in the new millennium ; Current Opinion in Immunology; Vol. 15; No. 4; 385-392; 10.1016/S0952-7915(03)00073-6
Dickinson, Mary E. and Simbuerger, Eva, et el. (2003) Multiphoton excitation spectra in biological samples ; Journal of Biomedical Optics; Vol. 8; No. 3; 329-338; 10.1117/1.1583734
McBride, Helen J. and Fatke, Bastian, et el. (2003) Wnt signaling components in the chicken intestinal tract ; Developmental Biology; Vol. 256; No. 1; 18-33; 10.1016/S0012-1606(02)00118-5
Hove, Jay Robert and Köster, Reinhard W., et el. (2003) Quantitative mapping of intracardiac blood flow in embryonic zebrafish ; FASEB Journal; Vol. 17; No. 4; A7-A7
Chen, Hsiuchen and Detmer, Scott A., et el. (2003) Mitofusins Mfn1 and Mfn2 coordinately regulate
mitochondrial fusion and are essential for embryonic development ; Journal of Cell Biology; Vol. 160; No. 2; 189-200; PMCID PMC2172648; 10.1083/jcb.200211046
Hove, Jay R. and Köster, Reinhard W., et el. (2003) Intracardiac fluid forces are an essential epigenetic factor for embryonic cardiogenesis ; Nature; Vol. 421; No. 6919; 172-177; 10.1038/nature01282
Jones, E. A. V. and Crotty, D., et el. (2002) Dynamic In Vivo Imaging of Postimplantation Mammalian Embryos Using Whole Embryo Culture ; Genesis; Vol. 34; No. 4; 228-235; 10.1002/gene.10162
Kulesa, Paul M. and Fraser, Scott E. (2002) Cell Dynamics During Somite Boundary Formation Revealed by Time-Lapse Analysis ; Science; Vol. 298; No. 5595; 991-995; 10.1126/science.1075544
Ewald, Andrew J. and McBride, Helen, et el. (2002) Surface imaging microscopy, an automated method for visualizing whole embryo samples in three dimensions at high resolution ; Developmental Dynamics; Vol. 225; No. 3; 369-375; 10.1002/dvdy.10169
Ruffins, Seth W. and Jacobs, Russell E., et el. (2002) Towards a Tralfamadorian view of the embryo: multidimensional imaging of development ; Current Opinion in Neurobiology; Vol. 12; No. 5; 580-586; 10.1016/S0959-4388(02)00366-5
Dmochowski, Ivan J. and Dmochowski, Jane E., et el. (2002) Quantitative imaging of cis-regulatory reporters in living embryos ; Proceedings of the National Academy of Sciences of the United States of America; Vol. 99; No. 20; 12895-12900; PMCID PMC130556; 10.1073/pnas.202483199
Modo, Michel and Cash, Diana, et el. (2002) Tracking Transplanted Stem Cell Migration Using Bifunctional, Contrast Agent-Enhanced, Magnetic Resonance Imaging ; NeuroImage; Vol. 17; No. 2; 803-811; 10.1006/nimg.2002.1194
Acevedo-Bolton, G. and Hove, J. R., et el. (2002) In-Vivo Applications of Microscale Digital Particle Image Velocimetry ; ISBN 0780376129; Second Joint EMBS/BMES Conference, Houston TX, 23-25 October 2002; 1303-1304; 10.1109/IEMBS.2002.1106399
Wallingford, John B. and Fraser, Scott E., et el. (2002) Convergent Extension: The Molecular Control of Polarized Cell Movement during Embryonic Development ; Developmental Cell; Vol. 2; No. 6; 695-706; 10.1016/S1534-5807(02)00197-1
Potter, Steve M. and Zheng, Chen, et el. (2001) Structure and Emergence of Specific Olfactory Glomeruli in the Mouse ; Journal of Neuroscience; Vol. 21; No. 24; 9713-9723; PMCID PMC2570017
Köster, Reinhard W. and Fraser, Scott E. (2001) Direct imaging of in vivo neuronal migration in the developing cerebellum ; Current Biology; Vol. 11; No. 23; 1858-1863; 10.1016/S0960-9822(01)00585-1
Lichtman, Jeff W. and Fraser, Scott E. (2001) The neuronal naturalist: watching neurons in their native habitat ; Nature Neuroscience; Vol. 4; No. S; 1215-1220; 10.1038/nn754
Stern, Claudio D. and Fraser, Scott E. (2001) Tracing the lineage of tracing cell lineages ; Nature Cell Biology; Vol. 3; No. 9; E216-E218; 10.1038/ncb0901-e216
Thakur, Anjani and Lansford, Rusty, et el. (2001) Gene transfer to the embryo: Strategies for the delivery and expression of proteins at 48 to 56 hours postfertilization ; Journal of Pediatric Surgery; Vol. 36; No. 8; 1304-1307; 10.1053/jpsu.2001.25804
Lansford, Rusty and Bearman, Gregory, et el. (2001) Resolution of multiple green fluorescent protein color variants and dyes using two-photon microscopy and imaging spectroscopy ; Journal of Biomedical Optics; Vol. 6; No. 3; 311-318; 10.1117/1.1383780
Mathis, Luc and Kulesa, Paul M., et el. (2001) FGF receptor signalling is required to maintain neural progenitors during Hensen's node progression ; Nature Cell Biology; Vol. 3; No. 6; 559-566; 10.1038/35078535
Köster, Reinhard W. and Fraser, Scott E. (2001) Tracing Transgene Expression in Living Zebrafish Embryos ; Developmental Biology; Vol. 233; No. 2; 329-346; 10.1006/dbio.2001.0242
Wallingford, John B. and Ewald, Andrew J., et el. (2001) Calcium signaling during convergent extension in Xenopus ; Current Biology; Vol. 11; No. 9; 652-661; 10.1016/S0960-9822(01)00201-9
Dickinson, Mary E. and Longmuir, Kenneth J., et el. (2001) Analysis of somitogenesis using multiphoton laser scanning microscopy (MPLSM) ; ISBN 9780819439406; Multiphoton Microscopy in the Biomedical Sciences; 18-26; 10.1117/12.424570
Cramer, Karina S. and Fraser, Scott E., et el. (2000) Embryonic Origins of Auditory Brain-Stem Nuclei in the Chick Hindbrain ; Developmental Biology; Vol. 224; No. 2; 138-151; 10.1006/dbio.2000.9779
Kulesa, Paul and Fraser, Scott, et el. (2000) In ovo time-lapse analysis after dorsal neural tube ablation shows rerouting of chick hindbrain neural crest ; Development; Vol. 127; No. 13; 2843-2852
Wallingford, John B. and Rowning, Brian A., et el. (2000) Dishevelled controls cell polarity during Xenopus gastrulation ; Nature; Vol. 405; No. 6782; 81-85; 10.1038/35011077
Hoeling, Barbara M. and Fernandez, Andrew D., et el. (2000) An optical coherence microscope for 3-dimensional imaging in developmental biology ; Optics Express; Vol. 6; No. 7; 136-146
Kulesa, Paul M. and Fraser, Scott E. (2000) In ovo time-lapse analysis of chick hindbrain neural crest cell migration shows cell interactions during migration to the branchial arches ; Development; Vol. 127; No. 6; 1161-1172
Rothbächer, Ute and Laurent, Micheline N., et el. (2000) Dishevelled phosphorylation, subcellular localization and multimerization regulate its role in early embryogenesis ; EMBO Journal; Vol. 19; No. 5; 1010-1022; 10.1093/emboj/19.5.1010
Louie, Angelique Y. and Hüber, Martina M., et el. (2000) In vivo visualization of gene expression using magnetic resonance imaging ; Nature Biotechnology; Vol. 18; No. 3; 321-325; 10.1038/73780
Fraser, Scott E. and Harland, Richard M. (2000) The Molecular Metamorphosis of Experimental Embryology ; Cell; Vol. 100; No. 1; 41-55; 10.1016/S0092-8674(00)81682-7
Okada, Ami and Lansford, Rusty, et el. (1999) Imaging Cells in the Developing Nervous System with Retrovirus Expressing Modified Green Fluorescent Protein ; Experimental Neurology; Vol. 156; No. 2; 394-406; 10.1006/exnr.1999.7033
Li, Wen-hong and Fraser, Scott E., et el. (1999) A Calcium-Sensitive Magnetic Resonance Imaging Contrast Agent ; Journal of the American Chemical Society; Vol. 121; No. 6; 1413-1414; 10.1021/ja983702l
Jacobs, Russell E. and Ahrens, Eric T., et el. (1999) Looking deeper into vertebrate development ; Trends in Cell Biology; Vol. 9; No. 2; 73-76; 10.1016/S0962-8924(98)01435-4
Kulesa, Paul M. and Fraser, Scott E. (1999) Confocal Imaging of Living Cells in Intact Embryos ; ISBN 978-0-89603-526-3; Confocal Microscopy Methods and Protocols; 205-222; 10.1385/1-59259-722-X:205
Kulesa, P. M. and Fraser, S. E. (1998) Neural Crest Cell Dynamics Revealed by Time-Lapse Video Microscopy of Whole Embryo Chick Explant Cultures ; Developmental Biology; Vol. 204; No. 2; 327-344; 10.1006/dbio.1998.9082
Kim, Stuart K. and Fraser, Scott E. (1998) Pattern formation and developmental mechanisms. Converging views of diverging pathways ; Current Opinion in Genetics and Development; Vol. 8; No. 4; 383-385; 10.1016/S0959-437X(98)80106-8
Ahrens, E. T. and Rothbächer, U., et el. (1998) A model for MRI contrast enhancement using T_1 agents ; Proceedings of the National Academy of Sciences of the United States of America; Vol. 95; No. 15; 8443-8448; PMCID PMC21095
Ahrens, Eric T. and Laidlaw, David H., et el. (1998) MR Microscopy of Transgenic Mice that Spontaneously
Acquire Experimental Allergic Encephalomyelitis ; Magnetic Resonance in Medicine; Vol. 40; No. 1; 119-132; 10.1002/mrm.1910400117
Woo, Katherine and Fraser, Scott E. (1998) Specification of the Hindbrain Fate in the Zebrafish ; Developmental Biology; Vol. 197; No. 2; 283-296; 10.1006/dbio.1998.8870
Hüber, Martina M. and Staubli, Andrea B., et el. (1998) Fluorescently Detectable Magnetic Resonance Imaging Agents ; Bioconjugate Chemistry; Vol. 9; No. 2; 242-249; 10.1021/bc970153k
Kulesa, Paul M. and Fraser, Scott E. (1998) Segmentation of the vertebrate hindbrain: a time-lapse analysis ; International Journal of Developmental Biology; Vol. 42; No. 3; 385-392
Bronner-Fraser, Marianne and Fraser, Scott E. (1997) Differentiation of the vertebrate neural tube ; Current Opinion in Cell Biology; Vol. 9; No. 6; 885-891; 10.1016/S0955-0674(97)80092-0
Kato, Keiko and O'dowd, Diane K., et el. (1997) Heterogeneous Expression of Multiple Putative Patterning Genes by Single Cells from the Chick Hindbrain ; Developmental Biology; Vol. 191; No. 2; 259-269; 10.1006/dbio.1997.8717
Krull, Catherine E. and Lansford, Rusty, et el. (1997) Interactions of Eph-related receptors and ligands confer rostrocaudal pattern to trunk neural crest migration ; Current Biology; Vol. 7; No. 8; 571-580; 10.1016/S0960-9822(06)00256-9
Woo, Katherine and Fraser, Scott E. (1997) Specification of the Zebrafish Nervous System by Nonaxial Signals ; Science; Vol. 277; No. 5323; 254-257; 10.1126/science.277.5323.254
Cohen-Cory, Susana and Escandón, Enrique, et el. (1996) The Cellular Patterns of BDNF and trkB Expression Suggest Multiple Roles for BDNF during Xenopus Visual System Development ; Developmental Biology; Vol. 179; No. 1; 102-115; 10.1006/dbio.1996.0244
Potter, Steve M. and Wang, Chun-Ming, et el. (1996) Intravital imaging of green fluorescent protein using two-photon laser-scanning microscopy ; Gene; Vol. 173; No. 1; 25-31; 10.1016/0378-1119(95)00681-8
Shih, John and Fraser, Scott E. (1996) Characterizing the zebrafish organizer: microsurgical analysis at the early-shield stage ; Development; Vol. 122; No. 4; 1313-1322
Fraser, Scott E. (1996) Iontophoretic Dye Labeling of Embryonic Cells ; ISBN 978-0-12-564153-1; Methods in Avian Embryology; 147-160; 10.1016/S0091-679X(08)60627-5
Potter, Steve M. and Pine, Jerome, et el. (1996) Neural Transplant Staining with DiI and Vital Imaging by 2-Photon Laser-Scanning Microscopy ; Scanning Microscopy; Vol. 10; 189-199; PMCID PMC2585498
Artinger, Kristin B. and Fraser, Scott, et el. (1995) Dorsal and Ventral Cell Types Can Arise from Common Neural Tube Progenitors ; Developmental Biology; Vol. 172; No. 2; 591-601; 10.1006/dbio.1995.8038
Cohen-Cory, Susana and Fraser, Scott E. (1995) Effects of brain-derived neurotrophic factor on optic axon branching and remodelling in vivo ; Nature; Vol. 378; No. 6553; 192-196; 10.1038/378192a0
Krull, Catherine E. and Collazo, Andres, et el. (1995) Segmental migration of trunk neural crest: time-lapse analysis reveals a role for PNA-binding molecules ; Development; Vol. 121; No. 11; 3733-3743
Kayyem, Jon Faiz and Kumar, Roshan M., et el. (1995) Receptor-targeted co-transport of DNA and magnetic resonance contrast agents ; Chemistry and Biology; Vol. 2; No. 9; 615-620; 10.1016/1074-5521(95)90126-4
Shih, John and Fraser, Scott E. (1995) Distribution of tissue progenitors within the shield region of the zebrafish gastrula ; Development; Vol. 121; No. 9; 2755-2765
Miller, Jeffrey and Fraser, Scott E., et el. (1995) Dynamics of thin filopodia during sea urchin gastrulation ; Development; Vol. 121; No. 8; 2501-2511
Woo, Katherine and Fraser, Scott E. (1995) Order and coherence in the fate map of the zebrafish nervous system ; Development; Vol. 121; No. 8; 2595-2609
Woo, Katherine and Shih, John, et el. (1995) Fate maps of the zebrafish embryo ; Current Opinion in Genetics and Development; Vol. 5; No. 4; 439-443; 10.1016/0959-437X(95)90046-J
Birgbauer, Eric and Sechrist, John, et el. (1995) Rhombomeric origin and rostrocaudal reassortment of neural crest cells revealed by intravital microscopy ; Development; Vol. 121; No. 4; 935-945
Ghosh, Pratik and O'Dell, Mark, et el. (1994) Mouse Lemur Microscopic MRI Brain Atlas ; NeuroImage; Vol. 1; No. 4; 345-349; 10.1006/nimg.1994.1019
Jacobs, Russell E. and Fraser, Scott E. (1994) Imaging neuronal development with magnetic resonance imaging (NMR) microscopy ; Journal of Neuroscience Methods; Vol. 54; No. 2; 189-196; 10.1016/0165-0270(94)90192-9
Serbedzija, George N. and Fraser, Scott E., et el. (1994) Developmental potential of trunk neural crest cells in the mouse ; Development; Vol. 120; No. 7; 1709-1718
Birgbauer, Eric and Fraser, Scott E. (1994) Violation of cell lineage restriction compartments in the chick hindbrain ; Development; Vol. 120; No. 6; 1347-1356
Collazo, Andres and Fraser, Scott E., et el. (1994) A dual embryonic origin for vertebrate mechanoreceptors ; Science; Vol. 264; No. 5157; 426-430; 10.1126/science.8153631
O'Rourke, Nancy A. and Cline, Hollis T., et el. (1994) Rapid Remodeling of Retinal Arbors in the Tectum with and without Blockade of Synaptic Transmission ; Neuron; Vol. 12; No. 4; 921-934; 10.1016/0896-6273(94)90343-3
Cohen-Cory, Susana and Fraser, Scott E. (1994) BDNF in the Development of the Visual System of Xenopus ; Neuron; Vol. 12; No. 4; 747-761; 10.1016/0896-6273(94)90328-X
Jacobs, Russell E. and Fraser, Scott E. (1994) Magnetic resonance microscopy of embryonic cell lineages and movements ; Science; Vol. 263; No. 5147; 681-684; 10.1126/science.7508143
Kullberg, R. W. and Zheng, Y. C., et el. (1994) Structure and expression of the nicotinic acetylcholine receptor beta subunit of Xenopus laevis ; Receptors & Channels; Vol. 2; No. 1; 23-31
Fraser, Scott E. (1993) Segmentation moves to the fore ; Current Biology; Vol. 3; No. 11; 787-789; 10.1016/0960-9822(93)90033-K
Serras, Florenci and Fraser, Scott, et el. (1993) Asymmetric patterns of gap junctional communication in developing chicken skin ; Development; Vol. 119; No. 1; 85-96
Moon, Randall T. and Campbell, Robert M., et el. (1993) Xwnt-5A: a maternal Wnt that affects morphogenetic movements after overexpression in embryos of Xenopus laevis ; Development; Vol. 119; No. 1; 97-111
Wetts, Richard and Kook, Ji Hae, et el. (1993) Proportion of Proliferative Cells in the Tadpole Retina Is Increased After Embryonic Lesion ; Developmental Dynamics; Vol. 198; No. 1; 54-64; 10.1002/aja.1001980106
Scherson, Talma and Serbedzija, George, et el. (1993) Regulative capacity of the cranial neural tube to form neural crest ; Development; Vol. 118; No. 4; 1049-1061
Sechrist, J. and Serbedzija, G. N., et el. (1993) Segmental migration of the hindbrain neural crest does not arise from its segmental generation ; Development; Vol. 118; No. 3; 691-703
Collazo, Andres and Fraser, Scott E., et el. (1993) Vital dye labelling of Xenopus laevis trunk neural crest reveals multipotency and novel pathways of migration ; Development; Vol. 118; No. 2; 363-376
Ivins, Jonathan K. and Clark, Steven M., et el. (1993) Biological microscopy: the emergence of digital microscopy ; Current Opinion in Biotechnology; Vol. 4; No. 1; 69-74; 10.1016/0958-1669(93)90035-U
Serbedzija, George N. and Fraser, Scott E., et el. (1992) Vital dye analysis of cranial neural crest cell migration in the mouse embryo ; Development; Vol. 116; No. 2; 297-307
Fraser, Scott E. (1992) Patterning of retinotectal connections in the vertebrate visual system ; Current Opinion in Neurobiology; Vol. 2; No. 1; 83-87; 10.1016/0959-4388(92)90167-J
Cameron, R. Andrew and Fraser, Scott E., et el. (1991) Macromere cell fates during sea urchin development ; Development; Vol. 113; No. 4; 1085-1091
Stern, Claudio D. and Jacques, Karen F., et el. (1991) Segmental lineage restrictions in the chick embryo spinal cord depend on the adjacent somites ; Development; Vol. 113; No. 1; 239-244
Fraser, Scott E. and Bronner-Fraser, Marianne (1991) Migrating neural crest cells in the trunk of the avian embryo are multipotent ; Development; Vol. 112; No. 4; 913-922
Fraser, Scott E. (1991) Pattern formation in the vertebrate nervous system ; Current Opinion in Genetics and Development; Vol. 1; No. 2; 217-220; 10.1016/S0959-437X(05)80073-5
Bronner-Fraser, M. and Stern, C. D., et el. (1991) Analysis of neural crest cell lineage and migration ; Journal of craniofacial genetics and developmental biology; Vol. 11; No. 4; 214-22
Fraser, Scott E. and Bronner-Fraser, Marianne (1991) Cell lineage analysis of the avian neural crest ; Development; Vol. 113; No. S2; 17-22
Wetts, Richard and Fraser, Scott E. (1991) Microinjection of fluorescent tracers to study neural cell lineages ; Development; Vol. 113; S1-S8
Serbedzija, George N. and Burgan, Scott, et el. (1991) Vital dye labelling demonstrates a sacral neural crest contribution to the enteric nervous system of chick and mouse embryos ; Development; Vol. 111; No. 4; 857-866
Lynch, Kathryn and Fraser, Scott E. (1990) Cell Migration in the Formation of the Pronephric Duct in Xenopus laevis ; Developmental Biology; Vol. 142; No. 2; 283-292; 10.1016/0012-1606(90)90349-N
Stollberg, Jes and Fraser, Scott E. (1990) Acetylcholine Receptor Clustering is Triggered by a Change in the Density of a Nonreceptor Molecule ; Journal of Cell Biology; Vol. 111; No. 5; 2029-2039; PMCID PMC2116306; 10.1083/jcb.111.5.2029
Fraser, Scott E. and O'Rourke, Nancy A. (1990) In situ analysis of neuronal dynamics and positional cues in the patterning of nerve connections ; Journal of Experimental Biology; Vol. 153; 61-70
O'Rourke, Nancy A. and Fraser, Scott E. (1990) Dynamic Changes in Optic Fiber Terminal Arbors Lead to Retinotopic Map Formation: An In Vivo Confocal Microscopic Study ; Neuron; Vol. 5; No. 2; 159-171; 10.1016/0896-6273(90)90306-Z
Jursnich, Victoria A. and Fraser, Scott E., et el. (1990) Defective Gap-Junctional Communication Associated with Imaginal Disc Overgrowth and Degeneration Caused by Mutations of the dco Gene in Drosophila ; Developmental Biology; Vol. 140; No. 2; 413-429; 10.1016/0012-1606(90)90090-6
Serbedzija, George N. and Fraser, Scott E., et el. (1990) Pathways of trunk neural crest cell migration in the mouse embryo as revealed by vital dye labelling ; Development; Vol. 108; No. 4; 605-612
Stollberg, Jes and Fraser, Scott E. (1990) Local Accumulation of Acetylcholine Receptors is Neither Necessary Nor Sufficient to Induce Cluster Formation ; Journal of Neuroscience; Vol. 10; No. 1; 247-255; PMCID PMC6570350; 10.1523/jneurosci.10-01-00247.1990
Cameron, R. Andrew and Fraser, Scott E., et el. (1990) Segregation of Oral from Aboral Ectoderm Precursors Is Completed at Fifth Cleavage in the Embryogenesis of Strongylocentrotus purpuratus ; Developmental Biology; Vol. 137; No. 1; 77-85; 10.1016/0012-1606(90)90009-8
Fraser, Scott E. and Perkel, Donald H. (1990) Competitive and positional cues in the patterning of nerve connections ; Journal of Neurobiology; Vol. 21; No. 1; 51-72; 10.1002/neu.480210105
Van Essen, David C. and Gordon, H., et el. (1990) Synaptic dynamics at the neuromuscular junction: Mechanisms and models ; Journal of Neurobiology; Vol. 21; No. 1; 223-249; 10.1002/neu.480210115
Bronner-Fraser, Marianne and Fraser, Scott (1989) Developmental potential of avian trunk neural crest cells in situ ; Neuron; Vol. 3; No. 6; 755-766; 10.1016/0896-6273(89)90244-4
Wetts, Richard and Serbedzija, George N., et el. (1989) Cell Lineage Analysis Reveals Multipotent Precursors in the Ciliary Margin of the Frog Retina ; Developmental Biology; Vol. 136; No. 1; 254-263; 10.1016/0012-1606(89)90146-2
Cameron, R. Andrew and Fraser, Scott E., et el. (1989) The oral-aboral axis of a sea urchin embryo is specified by first cleavage ; Development; Vol. 106; No. 4; 641-647
Serbedzija, George N. and Fraser, Scott E., et el. (1989) A vital dye analysis of the timing and pathways of avian trunk neural crest cell migration ; Development; Vol. 106; No. 4; 809-816
O'Rourke, Nancy A. and Fraser, Scott E. (1989) Gradual Appearance of a Regulated Retinotectal Projection Pattern in Xenopus laevis ; Developmental Biology; Vol. 132; No. 1; 251-265; 10.1016/0012-1606(89)90221-2
Cooper, Mark S. and Miller, John P., et el. (1989) Electrophoretic Repatterning of Charged Cytoplasmic Molecules within Tissues Coupled by Gap Junctions by Externally Applied Electric Fields ; Developmental Biology; Vol. 132; No. 1; 179-188; 10.1016/0012-1606(89)90216-9
Wetts, Richard and Fraser, Scott E. (1989) Slow intermixing of cells during Xenopus embryogenesis contributes to the consistency of the blastomere fate map ; Development; Vol. 105; No. 1; 9-15
Stollberg, Jes and Fraser, Scott E. (1988) Acetylcholine Receptors and Concanavalin A-Binding Sites on Cultured Xenopus Muscle Cells: Electrophoresis, Diffusion, and Aggregation ; Journal of Cell Biology; Vol. 107; No. 4; 1397-1408; PMCID PMC2115237
Bronner-Fraser, Marianne and Fraser, Scott E. (1988) Cell lineage analysis reveals multipotency of some avian neural crest cells ; Nature; Vol. 335; No. 6186; 161-164; 10.1038/335161a0
Fraser, Scott E. and Carhart, M. Scott, et el. (1988) Alterations in the Xenopus Retinotectal Projection by Antibodies to Xenopus N-CAM ; Developmental Biology; Vol. 129; No. 1; 217-230; 10.1016/0012-1606(88)90176-5
Bryant, Peter J. and Fraser, Scott E. (1988) Wound Healing, Cell Communication, and DNA Synthesis during lmaginal Disc Regeneration in Drosophila ; Developmental Biology; Vol. 127; No. 1; 197-208; 10.1016/0012-1606(88)90201-1
Krotoski, Danuta M. and Fraser, Scott E., et el. (1988) Mapping of Neural Crest Pathways in Xenopus laevis Using Inter- and Intra-specific Cell Markers ; Developmental Biology; Vol. 127; No. 1; 119-132; 10.1016/0012-1606(88)90194-7
Wetts, Richard and Fraser, S. E. (1988) Multipotent precursors can give rise to all major cell types of the frog retina ; Science; Vol. 239; No. 4844; 1142-1145; 10.1126/science.2449732
Bronner-Fraser, Marianne and Fraser, Scott E. (1988) Application of new technologies to studies of neural crest migration and differentiation ; American Journal of Medical Genetics; Vol. 31; No. S1; 23-39; 10.1002/ajmg.1320310509
Stern, Claudio D. and Fraser, Scott E., et el. (1988) A cell lineage analysis of segmentation in the chick embryo ; Development; Vol. 104; No. S; 231-244
Fraser, Scott and Green, Colin R., et el. (1987) Selective Disruption of Gap Junctional Communication Interferes with a Patterning Process in Hydra ; Science; Vol. 237; No. 4810; 49-55; 10.1126/science.3037697
Fraser, Scott E. and Hunt, R. Kevin (1986) A physiological measure of shifting connections in the Rana pipiens retinotectal system ; Journal of Embryology and Experimental Morphology; Vol. 94; 149-161
O'Rourke, Nancy A. and Fraser, Scott E. (1986) Pattern Regulation in the Eyebud of Xenopus Studied with a Vital-Dye Fiber-Tracing Technique ; Developmental Biology; Vol. 114; No. 2; 277-288; 10.1016/0012-1606(86)90192-2
O'Rourke, Nancy A. and Fraser, Scott E. (1986) Dynamic Aspects of Retinotectal Map Formation Revealed by a Vital-Dye Fiber-Tracing Technique ; Developmental Biology; Vol. 114; No. 2; 265-276; 10.1016/0012-1606(86)90191-0
O'Rourke, N. A. and Fraser, S. E. (1986) A vital-dye fiber-tracing technique to examine neuronal patterning and pattern regulation in the Xenopus eyebud ; Progress in Clinical and Biological Research; Vol. 217B; 113-127
Fraser, Scott E. and Bryant, Peter J. (1985) Patterns of dye coupling in the imaginal wing disk of Drosophila melanogaster ; Nature; Vol. 317; No. 6037; 533-536; 10.1038/317533a0
Fraser, Scott E. and Murray, Ben A., et el. (1984) Alteration of the retinotectal map in Xenopus by antibodies to neural cell adhesion molecules ; Proceedings of the National Academy of Sciences of the United States of America; Vol. 81; No. 13; 4222-4226; PMCID PMC345401; 10.1073/pnas.81.13.4222
Ide, Charles F. and Fraser, Scott E., et el. (1983) Eye dominance columns from an isogenic double-nasal frog eye ; Science; Vol. 221; No. 4607; 293-295; 10.1126/science.6857287
Fraser, Scott E. (1983) Fiber Optic Mapping of the Xenopus Visual System: Shift in the Retinotectal Projection during Development ; Developmental Biology; Vol. 95; No. 2; 505-511; 10.1016/0012-1606(83)90053-2
Fraser, Scott E. and Bode, Hans R. (1981) Epithelial cells of Hydra are dye-coupled ; Nature; Vol. 294; No. 5839; 356-358; 10.1038/294356a0
Fraser, Scott E. and Hunt, R. K. (1980) Retinotectal Plasticity in Xenopus: Anomalous lpsilateral Projection following Late Larval Eye Removal ; Developmental Biology; Vol. 79; No. 2; 444-452; 10.1016/0012-1606(80)90129-3
Fraser, Scott E. (1980) A Differential Adhesion Approach to the Patterning of Nerve Connections ; Developmental Biology; Vol. 79; No. 2; 453-464; 10.1016/0012-1606(80)90130-X
Fraser, Scott E. and Hunt, R. Kevin (1980) Retinotectal Specificity: Models and Experiments in Search of a Mapping Function ; Annual Review of Neuroscience; Vol. 3; No. 1; 319-352; 10.1146/annurev.ne.03.030180.001535