Fraser, Scott E.

Combined from CaltechAUTHORS

• Jacky, Lucien and Yurk, Dominic, et el. (2021) Robust Multichannel Encoding for Highly Multiplexed Quantitative PCR; Analytical Chemistry; Vol. 93; No. 9; 4208-4216; 10.1021/acs.analchem.0c04626
• Trivedi, Vikas and Madaan, Sara, et el. (2021) Imaging the Beating Heart with Macroscopic Phase Stamping; 10.48550/arXiv.2011.01688
• Rajagopal, Aditya and Yurk, Dominic, et el. (2019) Significant Expansion of Real-Time PCR Multiplexing with Traditional Chemistries using Amplitude Modulation; Scientific Reports; Vol. 9; Art. No. 1053; PMCID PMC6355831; 10.1038/s41598-018-37732-y
• Li, Yuwei and Junge, Jason A., et el. (2018) Discs large 1 controls daughter-cell polarity after cytokinesis in vertebrate morphogenesis; Proceedings of the National Academy of Sciences of the United States of America; Vol. 115; No. 46; E10859-E10868; PMCID PMC6243286; 10.1073/pnas.1713959115
• Trivedi, Vikas and Choi, Harry M. T., et el. (2018) Multidimensional quantitative analysis of mRNA expression within intact vertebrate embryos; Development; Vol. 145; No. 1; Art. No. 156869; PMCID PMC5825878; 10.1242/dev.156869
• Ojosnegros, Samuel and Cutrale, Francesco, et el. (2017) Eph-ephrin signaling modulated by polymerization and condensation of receptors; Proceedings of the National Academy of Sciences of the United States of America; Vol. 114; No. 50; 13188-13193; PMCID PMC5740673; 10.1073/pnas.1713564114
• Lee, Daniel A. and Andreev, Andrey, et el. (2017) Genetic and neuronal regulation of sleep by neuropeptide VF; eLife; Vol. 6; Art. No. e25727; PMCID PMC5705210; 10.7554/eLife.25727
• Rajagopal, A. and Yurk, D., et el. (2017) Multiplexing Method for Significantly Increasing the Bandwidth of qPCR Instrumentation; Journal of Molecular Diagnostics; Vol. 19; No. 6; 1046-1047; 10.1016/S1525-1578(17)30482-8
• Bower, Danielle V. and Lansdale, Nick, et el. (2017) SERCA directs cell migration and branching across species and germ layers; Biology Open; Vol. 6; No. 10; 1458-1471; PMCID PMC5665464; 10.1242/bio.026039
• Cutrale, Francesco and Trivedi, Vikas, et el. (2017) Hyperspectral phasor analysis enables multiplexed 5D in vivo imaging; Nature Methods; Vol. 14; No. 2; 149-152; 10.1038/nmeth.4134
• Cutrale, F. and Trivedi, Vikas, et el. (2016) Live 5D hyper-spectral fluorescence imaging of developing zebrafish; Molecular Biology of the Cell; Vol. 27; Art. No. P68
• Choi, Harry M. T. and Calvert, Colby R., et el. (2016) Mapping a multiplexed zoo of mRNA expression; Development; Vol. 143; No. 19; 3632-3637; PMCID PMC5087610; 10.1242/dev.140137
• Santos, Rosaysela and Kawauchi, Shimako, et el. (2016) Conditional Creation and Rescue of Nipbl-Deficiency in Mice Reveals Multiple Determinants of Risk for Congenital Heart Defects; PLoS Biology; Vol. 14; No. 9; Art. No. e2000197; PMCID PMC5016002; 10.1371/journal.pbio.2000197
• Ndjamen, Blaise and Joshi, Devashish S., et el. (2016) Characterization of Antibody Bipolar Bridging Mediated by the Human Cytomegalovirus Fc receptor gp68; Journal of Virology; Vol. 90; No. 6; 3262-3567; PMCID PMC4810659; 10.1128/JVI.02855-15
• Armani, Andrea M. and Alabi, Akinleye C., et el. (2015) Click chemistry surface functionalization for resonant micro-cavity sensors
• Huss, David and Benazeraf, Bertrand, et el. (2015) A transgenic quail model that enables dynamic imaging of amniote embryogenesis; Development; Vol. 142; No. 16; 2850-2859; PMCID PMC4550965; 10.1242/dev.121392
• Ruf-Zamojski, Frederique and Trivedi, Vikas, et el. (2015) Spatio-Temporal Differences in Dystrophin Dynamics at mRNA and Protein Levels Revealed by a Novel FlipTrap Line; PLoS ONE; Vol. 10; No. 6; Art. No. e0128944; PMCID PMC4471274; 10.1371/journal.pone.0128944
• Trivedi, Vikas and Truong, Thai V., et el. (2015) Dynamic structure and protein expression of the live embryonic heart captured by 2-photon light sheet microscopy and retrospective registration; Biomedical Optics Express; Vol. 6; No. 6; 2056-2066; PMCID PMC4473743; 10.1364/BOE.6.002056
• Li, Yuwei and Trivedi, Vikas, et el. (2015) Dynamic imaging of the growth plate cartilage reveals multiple contributors to skeletal morphogenesis; FASEB Journal; Vol. 29; No. 1 S; LB37
• Li, Yuwei and Trivedi, Vikas, et el. (2015) Dynamic imaging of the growth plate cartilage reveals multiple contributors to skeletal morphogenesis; Nature Communications; Vol. 6; No. 4; Art. No. 6798; PMCID PMC4403347; 10.1038/ncomms7798
• Huss, David and Choi, Harry M. T., et el. (2015) Combinatorial Analysis of mRNA Expression Patterns in Mouse Embryos Using Hybridization Chain Reaction; Cold Spring Harbor Protocols; Vol. 2015; No. 3; 259-268; 10.1101/pdb.prot083832
• Ndjamen, B. and Fraser, S. E., et el. (2014) Distinct Intracellular Trafficking Patterns of Host IgG by Herpes Virus Fc-Receptors
• Bower, Danielle V. and Lee, Hyung-Kook (Peter), et el. (2014) Airway branching has conserved needs for local parasympathetic innervation but not neurotransmission; BMC Biology; Vol. 12; Art. No. 92; PMCID PMC4255442; 10.1186/s12915-014-0092-2
• Ndjamen, Blaise and Farley, Alexander H., et el. (2014) The Herpes Virus Fc Receptor gE-gI Mediates Antibody Bipolar Bridging to Clear Viral Antigens from the Cell Surface; PLoS Pathogens; Vol. 10; No. 3; Art. No. e1003961; PMCID PMC3946383; 10.1371/journal.ppat.1003961
• Chandrashekran, Anil and Sarkar, Rupa, et el. (2014) Efficient generation of transgenic mice by lentivirus-mediated modification of spermatozoa; FASEB Journal; Vol. 28; No. 2; 569-579; 10.1096/fj.13-233999
• Cutrale, Francesco and Trivedi, Vikas, et el. (2014) A Spectral Phasor Perspective in Zebrafish Muscle Development; Biophysical Journal; Vol. 106; No. 2; 796A; 10.1016/j.bpj.2013.11.4367
• Trivedi, Vikas and Li, Yuwei, et el. (2014) How Embryonic Cartilage Grows: Insights Gained from Quantitative Live Imaging; Biophysical Journal; Vol. 106; No. 2; 575A; 10.1016/j.bpj.2013.11.3188
• Truong, Thai V. and Trivedi, Vikas, et el. (2014) Live 4D Imaging of the Embryonic Vertebrate Heart with Two-Photon Light Sheet Microscopy and Simultaneous Optical Phase Stamping; Biophysical Journal; Vol. 106; No. 2; 435A-436A; 10.1016/j.bpj.2013.11.2453
• Schwartz, Daniel M. and Fingler, Jeff, et el. (2014) Phase-Variance Optical Coherence Tomography - A Technique for Noninvasive Angiography; Ophtalmology; Vol. 121; No. 1; 180-187; PMCID PMC4190463; 10.1016/j.ophtha.2013.09.002
• Borges, R. M. and Horne, J. H., et el. (2013) A detailed description of an economical setup for electroporation of chick embryos in ovo; Brazilian Journal of Medical and Biological Research; Vol. 46; No. 9; 752-757; PMCID PMC3854436
• Kim, Dae Yu and Fingler, Jeff, et el. (2013) Optical imaging of the chorioretinal vasculature in the living human eye; Proceedings of the National Academy of Sciences of the United States of America; Vol. 110; No. 35; 14354-14359; PMCID PMC3761584; 10.1073/pnas.1307315110
• Trinh, Le A. and Fraser, Scott E. (2013) Enhancer and gene traps for molecular imaging and genetic analysis in zebrafish; Development, Growth & Differentiation; Vol. 55; No. 4; 434-445; 10.1111/dgd.12055
• Ndjamen, Blaise and Farley, Alexander, et el. (2013) Intracellular Trafficking of an Antibody Bipolar Bridged Complex of HSV-1 gE-gI, IgG, and a Viral Antigen; FASEB Journal; Vol. 27; Art. No. 767.3
• Kim, Dae Yu and Fingler, Jeff, et el. (2013) Visualization of human retinal and choroidal vascular networks with phase-variance optical coherence tomography; ISBN 978-0-8194-9336-1; Ophthalmic Technologies XXIII; Art. No. 856702; 10.1117/12.2004606
• Palanca, Ana Marie S. and Lee, Sung-Ling, et el. (2013) New transgenic reporters identify somatosensory neuron subtypes in larval zebrafish; Developmental Neurobiology; Vol. 73; No. 2; 152-167; PMCID PMC3541445; 10.1002/dneu.22049
• Su, Judith and Goldberg, Alex, et el. (2013) Frequency Locked Microtoroid Optical Resonators as a Non-Invasive Tumor Biopsy Alternative; Biophysical Journal; Vol. 104; No. 2; 528A; 10.1016/j.bpj.2012.11.2924
• Truong, Thai V. and Holland, Daniel B., et el. (2013) Imaging Proteins, Cells, and Tissues Dynamics during Embryogenesis with Two-Photon Light-Sheet Microscopy; Biophysical Journal; Vol. 104; No. 2; 337A; 10.1016/j.bpj.2012.11.1872
• Trivedi, Vikas and Truong, Thai V., et el. (2013) Dynamic Three-Dimensional Imaging of Cellular Shape Changes and Protein Expression in the Developing Zebrafish Heart; Biophysical Journal; Vol. 104; No. 2; 202A; 10.1016/j.bpj.2012.11.1140
• Seidl, Armin H. and Sanchez, Jason Tait, et el. (2013) Transgenic quail as a model for research in the avian nervous system: A comparative study of the auditory brainstem; Journal of Comparative Neurology; Vol. 521; No. 1; 5-23; 10.1002/cne.23187
• Armani, Andrea M. and Su, Tsu-Te J., et el. (2012) Micro-cavity gas and vapor sensors and detection methods
• Liu, Cambrian Y. and Xiao, Cheng, et el. (2012) Electrophysiological characterization of Grueneberg ganglion olfactory neurons: spontaneous firing, sodium conductance, and hyperpolarization-activated currents; Journal of Neurophysiology; Vol. 108; No. 5; 1318-1334; 10.1152/jn.00907.2011
• Liu, Cambrian Y. and Xiao, Cheng, et el. (2012) Electrophysiological characterization of Grueneberg ganglion olfactory neurons: spontaneous firing, sodium conductance, and hyperpolarization-activated currents; Journal of Neurophysiology; Vol. 108; No. 5; 1318-1334; PMCID PMC3544954
• Čulić-Viskota, Jelena and Dempsey, William P., et el. (2012) Surface functionalization of barium titanate SHG nanoprobes for in vivo imaging in zebrafish; Nature Protocols; Vol. 7; No. 9; 1618-1633; 10.1038/nprot.2012.087
• Dempsey, William P. and Fraser, Scott E., et el. (2012) SHG nanoprobes: Advancing harmonic imaging in biology; Bioessays; Vol. 34; No. 5; 351-360; 10.1002/bies.201100106
• Motaghiannezam, Reza and Schwartz, Daniel M., et el. (2012) In Vivo Human Choroidal Vascular Pattern Visualization Using High-Speed Swept-Source Optical Coherence Tomography at 1060 nm; Investigative Ophthalmology and Visual Science; Vol. 53; No. 4; 2337-2348; 10.1167/iovs.11-7823
• Dempsey, William P. and Fraser, Scott E., et el. (2012) PhOTO Zebrafish: A Transgenic Resource for In Vivo Lineage Tracing during Development and Regeneration; PLoS ONE; Vol. 7; No. 3; Art. No. e32888; PMCID PMC3303793; 10.1371/journal.pone.0032888
• Motaghiannezam, Reza and Fraser, Scott (2012) Differential intensity contrast swept source optical coherence tomography for human retinal vasculature visualization; ISBN 9780819488527; Ophthalmic technologies XXII : 21-22 January 20-12, San Francisco, California, United States; Art. No. 82090O; 10.1117/12.907149
• Motaghiannezam, Reza and Fraser, Scott (2012) Logarithmic intensity and speckle-based motion contrast methods for human retinal vasculature visualization using swept source optical coherence tomography; Biomedical Optics Express; Vol. 3; No. 3; 503-521; 10.1364/BOE.3.000503
• Kim, Dae Yu and Fingler, Jeff, et el. (2012) Visualization of human retinal capillary networks: a comparison of intensity, speckle-variance and phase-variance optical coherence tomography; ISBN 978-0-8194-8856-5; Optical Coherence Tomography and Coherence Domain Optical Methods in Biomedicine XVI; Art. No. 821307; 10.1117/12.906940
• Motaghiannezam, S. M. Reza and Koos, David, et el. (2012) Differential phase-contrast, swept-source optical coherence tomography at 1060 nm for in vivo human retinal and choroidal vasculature visualization; Journal of Biomedical Optics; Vol. 17; No. 2; Art. No. 026011; 10.1117/1.JBO.17.2.026011
• Armani, Andrea M. and Su, Tsu-Te J., et el. (2012) Micro-cavity gas and vapor sensors and detection methods
• Motaghiannezam, Reza and Fraser, Scott (2012) In vivo human retinal and choroidal vasculature visualization using differential phase contrast swept source optical coherence tomography at 1060 nm; ISBN 9780819488565; Optical coherence tomography and coherence domain optical methods in biomedicine XVI : 23-25 January 2012, San Francisco, California, United States; Art. No. 821304; 10.1117/12.910991
• Armani, Andrea M. and Alabi, Akinleye C., et el. (2012) Click chemistry surface functionalization for resonant micro-cavity sensors
• Kim, Dae Yu and Fingler, Jeff, et el. (2012) Noninvasive Imaging of the Foveal Avascular Zone with High-Speed, Phase-Variance Optical Coherence Tomography; Investigative Ophthalmology and Visual Science; Vol. 53; No. 1; 85-92; PMCID PMC3292386; 10.1167/iovs.11-8249
• Trihn, Le A. and Hochgreb, Tatiana, et el. (2011) A versatile gene trap to visualize and interrogate the function of the vertebrate proteome; Genes and Development; Vol. 25; No. 21; 2306-2320; PMCID PMC3219234; 10.1101/gad.174037.111
• Truong, Thai V. and Supatto, Willy, et el. (2011) Deep and fast live imaging with two-photon scanned light-sheet microscopy; Nature Methods; Vol. 8; No. 9; 757-760; 10.1038/nmeth.1652
• Cooley, James and Whitaker, Stacia, et el. (2011) Cytoskeletal polarity mediates localized induction of the heart progenitor lineage; Nature Cell Biology; Vol. 13; No. 8; 952-957; 10.1038/ncb2291
• Wu, Zhanhong and Todorov, Ivan, et el. (2011) In Vivo Imaging of Transplanted Islets with ^(64)Cu-DO3A-VS-Cys^(40)-Exendin-4 by Targeting GLP-1 Receptor; Bioconjugate Chemistry; Vol. 22; No. 8; 1587-1594; 10.1021/bc200132t
• Hochheiser, Harry and Aronow, Bruce J., et el. (2011) The FaceBase Consortium: A comprehensive program to facilitate craniofacial research; Developmental Biology; Vol. 355; No. 2; 175-182; PMCID PMC3440302; 10.1016/j.ydbio.2011.02.033
• Amit, Roee and Garcia, Hernan G., et el. (2011) Building Enhancers from the Ground Up: A Synthetic Biology Approach; Cell; Vol. 146; No. 1; 105-118; PMCID PMC3155781; 10.1016/j.cell.2011.06.024
• Ohn, Jungho and Yang, Jennifer, et el. (2011) High-speed multicolor microscopy of repeating dynamic processes; Genesis; Vol. 49; No. 7; 514-521; PMCID PMC3344748; 10.1002/dvg.20774
• Kim, Dae Yu and Fingler, Jeff, et el. (2011) In vivo volumetric imaging of human retinal circulation with phase-variance optical coherence tomography; Biomedical Optics Express; Vol. 2; No. 6; 1504-1513; PMCID PMC3114219; 10.1364/BOE.2.001504
• Caneparo, Luca and Pantazis, Periklis, et el. (2011) Intercellular Bridges in Vertebrate Gastrulation; PLoS ONE; Vol. 6; No. 5; Art. No. e20230; PMCID PMC3102083; 10.1371/journal.pone.0020230
• Lu, Tao and Lee, Hansuek, et el. (2011) High sensitivity nanoparticle detection using optical microcavities; Proceedings of the National Academy of Sciences of the United States of America; Vol. 108; No. 15; 5976-5979; PMCID PMC3076881; 10.1073/pnas.1017962108
• Wu, David and Freund, Jonathan B., et el. (2011) Mechanistic Basis of Otolith Formation during Teleost Inner Ear Development; Developmental Cell; Vol. 20; No. 2; 271-278; PMCID PMC4556435; 10.1016/j.devcel.2010.12.006
• Kim, Dae Yu and Fingler, Jeff, et el. (2011) Visualization of human retinal micro-capillaries with phase contrast high-speed optical coherence tomography; ISBN 978-0-81948-426-0; Optical Coherence Tomography and Coherence Domain Optical Methods in Biomedicine XV; Art. No. 78890H; 10.1117/12.873896
• Fingler, Jeff and Schwartz, Daniel M., et el. (2011) Extended volume retinal vascular imaging with phase variance contrast optical coherence tomography; ISBN 978-0-8194-8422-2; Ophthalmic Technologies XXI; Art. No. 78850I; 10.1117/12.873893
• Plachta, Nicolas and Bollenbach, Tobias, et el. (2011) Oct4 kinetics predict cell lineage patterning in the early mammalian embryo; Nature Cell Biology; Vol. 13; No. 2; 117-123; 10.1038/ncb2154
• Ezin, Akouavi M. and Sechrist, John W., et el. (2011) Early regulative ability of the neuroepithelium to form cardiac neural crest; Developmental Biology; Vol. 349; No. 2; 238-249; PMCID PMC3018664; 10.1016/j.ydbio.2010.10.032
• Žigman, Mihaela and Trinh, Le A., et el. (2011) Zebrafish Neural Tube Morphogenesis Requires Scribble-Dependent Oriented Cell Divisions; Current Biology; Vol. 21; No. 1; 79-86; PMCID PMC4308621; 10.1016/j.cub.2010.12.005
• Kasemeier-Kulesa, Jennifer C. and Lefcort, Frances, et el. (2011) Imaging Cell Migration in Chick Explant Cultures; ISBN 978-0-87969-940-6; Imaging in Developmental Biology: a laboratory manual; 291-298
• Kulesa, Paul M. and Fraser, Scott E. (2011) Live imaging of avian embryos; ISBN 978-0-87969-940-6; Imaging in Developmental Biology: a laboratory maniual; 85-99
• Quesada-Hernández, Elena and Caneparo, Luca, et el. (2010) Stereotypical Cell Division Orientation Controls Neural Rod Midline Formation in Zebrafish; Current Biology; Vol. 20; No. 21; 1966-1972; 10.1016/j.cub.2010.10.009
• Choi, Harry M. T. and Chang, Joann Y., et el. (2010) Programmable in situ amplification for multiplexed imaging of mRNA expression; Nature Biotechnology; Vol. 28; No. 11; 1208-1212; PMCID PMC3058322; 10.1038/nbt.1692
• Sato, Yuki and Poynter, Greg, et el. (2010) Dynamic Analysis of Vascular Morphogenesis Using Transgenic Quail Embryos; PLoS ONE; Vol. 5; No. 9; Art. No. e12674; PMCID PMC2939056; 10.1371/journal.pone.0012674
• Jerdeva, Galina V. and Tesar, Devin B., et el. (2010) Comparison of FcRn- and pIgR-Mediated Transport in MDCK Cells by Fluorescence Confocal Microscopy; Traffic; Vol. 11; No. 9; 1205-1220; PMCID PMC2975666; 10.1111/j.1600-0854.2010.01083.x
• Pantazis, Periklis and Maloney, James, et el. (2010) Second harmonic generating (SHG) nanoprobes for in vivo imaging; Proceedings of the National Academy of Sciences of the United States of America; Vol. 107; No. 33; 14535-14540; PMCID PMC2930484; 10.1073/pnas.1004748107
• Pikov, Victor and Arakaki, Xianghong, et el. (2010) Modulation of neuronal activity and plasma membrane properties with low-power millimeter waves in organotypic cortical slices; Journal of Neural Engineering; Vol. 7; No. 4; Art. No. 045003; 10.1088/1741-2560/7/4/045003
• Kulesa, P. M. and Bailey, C. M., et el. (2010) In Ovo Live Imaging of Avian Embryos; Cold Spring Harbor Protocols; Vol. 2010; No. 6; Art. No. 5446; PMCID PMC3491899; 10.1101/pdb.prot5446
• Fingler, Jeff and Zawadzki, Robert J., et el. (2009) Volumetric microvascular imaging of human retina using optical coherence tomography with a novel motion contrast technique; Optics Express; Vol. 17; No. 24; 22190-22200; PMCID PMC2791341; 10.1364/OE.17.022190
• Vermot, Julien and Forouhar, Arian S., et el. (2009) Reversing Blood Flows Act through klf2a to Ensure Normal Valvulogenesis in the Developing Heart; PLoS Biology; Vol. 7; No. 11; Art. No. e1000246; PMCID PMC2773122; 10.1371/journal.pbio.1000246
• Liu, Cambrian Y. and Fraser, Scott E., et el. (2009) Grueneberg ganglion olfactory subsystem employs a cGMP signaling pathway; Journal of Comparative Neurology; Vol. 516; No. 1; 36-48; PMCID PMC4314211; 10.1002/cne.22096
• Demyanenko, Andrey V. and Zhao, Lin, et el. (2009) A uniplanar three-axis gradient set for in vivo magnetic resonance microscopy; Journal of Magnetic Resonance; Vol. 200; No. 1; 38-48; 10.1016/j.jmr.2009.05.014
• Supatto, Willy and McMahon, Amy, et el. (2009) Quantitative imaging of collective cell migration during Drosophila gastrulation: multiphoton microscopy and computational analysis; Nature Protocols; Vol. 4; No. 10; 1397-1412; PMCID PMC2854020; 10.1038/nprot.2009.130
• Wu, David and Ghosh, Kingshuk, et el. (2009) Trajectory Approach to Two-State Kinetics of Single Particles on Sculpted Energy Landscapes; Physical Review Letters; Vol. 103; No. 5; Art. No. 050603; PMCID PMC3273425; 10.1103/PhysRevLett.103.050603
• Ezin, Akouavi M. and Fraser, Scott E., et el. (2009) Fate map and morphogenesis of presumptive neural crest and dorsal neural tube; Developmental Biology; Vol. 330; No. 2; 221-236; PMCID PMC2717095; 10.1016/j.ydbio.2009.03.018
• Supatto, Willy and McMahon, Amy, et el. (2009) Quantitative imaging of the collective cell movements shaping an embryo; ISBN 978-1-4244-2940-0; 42nd Asilomar Conference on Signals, Systems and Computers; 61-63; 10.1109/ACSSC.2008.5074361
• Supatto, Willy and Fraser, Scott E., et el. (2009) Probing cilia-driven flow in living embryos using femtosecond laser ablation and fast imaging; ISBN 978-0-8194-7449-0; Commercial and biomedical applications of ultrafast lasers IX; 10.1117/12.808330
• Pantazis, Periklis and Pu, Ye, et el. (2009) Second harmonic generating (SHG) nanoprobes: a new tool for biomedical imaging; ISBN 9780819474292; Multiphoton microscopy in the biomedical sciences IX; Art. No. 71831P; 10.1117/12.808434
• Reeves, Gregory T. and Fraser, Scott E. (2009) Biological Systems from an Engineer's Point of View; PLoS Biology; Vol. 7; No. 1; e1000021; PMCID PMC2628404; 10.1371/journal.pbio.1000021
• Colantonio, Jessica R. and Vermot, Julien, et el. (2009) The dynein regulatory complex is required for ciliary motility and otolith biogenesis in the inner ear; Nature; Vol. 457; No. 7226; 205-209; PMCID PMC3821763; 10.1038/nature07520
• Kulkarni, Rajan P. and Fraser, Scott E., et el. (2008) Characterization of high-Q optical microcavities using confocal microscopy; Optics Letters; Vol. 33; No. 24; 2931-2933; 10.1364/OL.33.002931
• McMahon, Amy and Supatto, Willy, et el. (2008) Dynamic Analyses of Drosophila Gastrulation Provide Insights into Collective Cell Migration; Science; Vol. 322; No. 5907; 1546-1550; PMCID PMC2801059; 10.1126/science.1167094
• Fingler, Jeff and Readhead, Carol, et el. (2008) Phase-Contrast OCT Imaging of Transverse Flows in the Mouse Retina and Choroid; Investigative Ophthalmology and Visual Science; Vol. 49; No. 11; 5055-5059; 10.1167/iovs.07-1627
• Supatto, Willy and Fraser, Scott E., et el. (2008) An all-optical approach for probing microscopic flows in living embryos; Biophysical Journal; Vol. 95; No. 4; L29-L31; 10.1529/biophysj.108.137786
• Lin, Alexander P. and Bennett, Eric, et el. (2008) Circumferential strain in the wall of the common carotid artery: Comparing displacement-encoded and cine MRI in volunteers; Magnetic Resonance in Medicine; Vol. 60; No. 1; 8-13; PMCID PMC2886512; 10.1002/mrm.21621
• Vermot, Julien and Fraser, Scott E., et el. (2008) Fast fluorescence microscopy for imaging the dynamics of embryonic development; HFSP Journal; Vol. 2; No. 3; 143-155; PMCID PMC2645566; 10.2976/1.2907579
• Armani, Andrea M. and Fraser, Scott E. (2008) Label-free detection of cytokines using optical microcavities; ISBN 9780819470379; Single Molecule Spectroscopy and Imaging; Art. No. 68620C; 10.1117/12.761002
• Armani, Andrea M. and Fraser, Scott E., et el. (2008) Label-free single-molecule all-optical sensor; ISBN 9780819470270; Optical Fibers and Sensors for Medical Diagnostics and Treatment Applications VIII; Art. No. 68520A; 10.1117/12.761007
• Lu, Jian and Pereira, Francisco, et el. (2008) Three-dimensional real-time imaging of cardiac cell motions in living embryos; Journal of Biomedical Optics; Vol. 13; No. 1; Art. No. 014006; 10.1117/1.2830824
• Bhattacharyya, Sujata and Kulesa, Paul M., et el. (2008) Vital labeling of embryonic cells using fluorescent dyes and proteins; ISBN 978-0-12-564174-6; Avian Embryology, 2nd Edition; 187-210; 10.1016/S0091-679X(08)00210-0
• Armani, Andrea M. and Fraser, Scott E., et el. (2007) Label-free, single molecule detection of cytokines using optical microcavities; ISBN 978-1-4244-0924-2; 2007 IEEE LEOS Annual Meeting Conference Proceedings; 596-597; 10.1109/LEOS.2007.4382547
• Fingler, Jeff and Schwartz, Dan, et el. (2007) Mobility and transverse flow visualization using phase variance contrast with spectral domain optical coherence tomography; Optics Express; Vol. 15; No. 20; 12636-12653
• Lucitti, Jennifer L. and Jones, Elizabeth A. V., et el. (2007) Vascular remodeling of the mouse yolk sac requires hemodynamic force; Development; Vol. 134; No. 18; 3317-3326; 10.1242/10.1242/dev.02883
• Megason, Sean G. and Fraser, Scott E. (2007) Imaging in Systems Biology; Cell; Vol. 130; No. 5; 784-795; 10.1016/j.cell.2007.08.031
• Armani, Andrea M. and Kulkarni, Rajan P., et el. (2007) Label-Free, Single-Molecule Detection with Optical Microcavities; Science; Vol. 317; No. 5839; 783-787; 10.1126/science.1145002
• Trinh, Le A. and McCutchen, Marshall, et el. (2007) Fluorescent in situ hybridization employing the conventional NBT/BCIP chromogenic stain; BioTechniques; Vol. 42; No. 6; 756-759; 10.2144/000112476
• Ruffins, Seth W. and Martin, Melanie, et el. (2007) Digital Three-Dimensional Atlas of Quail Development Using High-Resolution MRI; TheScientificWorld; Vol. 7; 592-604; 10.1100/tsw.2007.125
• Papan, Cyrus and Boulat, Benoit, et el. (2007) Formation of the dorsal marginal zone in Xenopus laevis analyzed by time-lapse microscopic magnetic resonance imaging; Developmental Biology; Vol. 305; No. 1; 161-171; 10.1016/j.ydbio.2007.02.005
• Fingler, J. and Williams, J., et el. (2007) Imaging vasculature independent of direction of flow using spectral domain optical coherence tomography; ISBN 9780819465429; Coherence Domain Optical Methods and Optical Coherence Tomography in Biomedicine XI; Art. No. 64290P; 10.1117/12.697231
• Hoeling, Barbara M. and Feldman, Stephanie S., et el. (2007) Motion-sensitive 3-D optical coherence microscope operating at 1300 nm for the visualization of early frog development; ISBN 9780819465429; Coherence Domain Optical Methods and Optical Coherence Tomography in Biomedicine XI; Art. No. 64292T; 10.1117/12.701420
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• Fraser, Scott E. (1992) Patterning of retinotectal connections in the vertebrate visual system; Current Opinion in Neurobiology; Vol. 2; No. 1; 83-87; 10.1016/0959-4388(92)90167-J
• Cameron, R. Andrew and Fraser, Scott E., et el. (1991) Macromere cell fates during sea urchin development; Development; Vol. 113; No. 4; 1085-1091
• Stern, Claudio D. and Jacques, Karen F., et el. (1991) Segmental lineage restrictions in the chick embryo spinal cord depend on the adjacent somites; Development; Vol. 113; No. 1; 239-244
• Fraser, Scott E. and Bronner-Fraser, Marianne (1991) Migrating neural crest cells in the trunk of the avian embryo are multipotent; Development; Vol. 112; No. 4; 913-922
• Fraser, Scott E. (1991) Pattern formation in the vertebrate nervous system; Current Opinion in Genetics and Development; Vol. 1; No. 2; 217-220; 10.1016/S0959-437X(05)80073-5
• Bronner-Fraser, M. and Stern, C. D., et el. (1991) Analysis of neural crest cell lineage and migration; Journal of craniofacial genetics and developmental biology; Vol. 11; No. 4; 214-22
• Serbedzija, George N. and Burgan, Scott, et el. (1991) Vital dye labelling demonstrates a sacral neural crest contribution to the enteric nervous system of chick and mouse embryos; Development; Vol. 111; No. 4; 857-866
• Fraser, Scott E. and Bronner-Fraser, Marianne (1991) Cell lineage analysis of the avian neural crest; Development; Vol. 113; No. S2; 17-22
• Wetts, Richard and Fraser, Scott E. (1991) Microinjection of fluorescent tracers to study neural cell lineages; Development; Vol. 113; S1-S8
• Lynch, Kathryn and Fraser, Scott E. (1990) Cell Migration in the Formation of the Pronephric Duct in Xenopus laevis; Developmental Biology; Vol. 142; No. 2; 283-292; 10.1016/0012-1606(90)90349-N
• Stollberg, Jes and Fraser, Scott E. (1990) Acetylcholine Receptor Clustering is Triggered by a Change in the Density of a Nonreceptor Molecule; Journal of Cell Biology; Vol. 111; No. 5; 2029-2039; PMCID PMC2116306; 10.1083/jcb.111.5.2029
• Fraser, Scott E. and O'Rourke, Nancy A. (1990) In situ analysis of neuronal dynamics and positional cues in the patterning of nerve connections; Journal of Experimental Biology; Vol. 153; 61-70
• O'Rourke, Nancy A. and Fraser, Scott E. (1990) Dynamic Changes in Optic Fiber Terminal Arbors Lead to Retinotopic Map Formation: An In Vivo Confocal Microscopic Study; Neuron; Vol. 5; No. 2; 159-171; 10.1016/0896-6273(90)90306-Z
• Jursnich, Victoria A. and Fraser, Scott E., et el. (1990) Defective Gap-Junctional Communication Associated with Imaginal Disc Overgrowth and Degeneration Caused by Mutations of the dco Gene in Drosophila; Developmental Biology; Vol. 140; No. 2; 413-429; 10.1016/0012-1606(90)90090-6
• Serbedzija, George N. and Fraser, Scott E., et el. (1990) Pathways of trunk neural crest cell migration in the mouse embryo as revealed by vital dye labelling; Development; Vol. 108; No. 4; 605-612
• Stollberg, Jes and Fraser, Scott E. (1990) Local Accumulation of Acetylcholine Receptors is Neither Necessary Nor Sufficient to Induce Cluster Formation; Journal of Neuroscience; Vol. 10; No. 1; 247-255; PMCID PMC6570350; 10.1523/jneurosci.10-01-00247.1990
• Fraser, Scott E. and Perkel, Donald H. (1990) Competitive and positional cues in the patterning of nerve connections; Journal of Neurobiology; Vol. 21; No. 1; 51-72; 10.1002/neu.480210105
• Van Essen, David C. and Gordon, H., et el. (1990) Synaptic dynamics at the neuromuscular junction: Mechanisms and models; Journal of Neurobiology; Vol. 21; No. 1; 223-249; 10.1002/neu.480210115
• Cameron, R. Andrew and Fraser, Scott E., et el. (1990) Segregation of Oral from Aboral Ectoderm Precursors Is Completed at Fifth Cleavage in the Embryogenesis of Strongylocentrotus purpuratus; Developmental Biology; Vol. 137; No. 1; 77-85; 10.1016/0012-1606(90)90009-8
• Bronner-Fraser, Marianne and Fraser, Scott (1989) Developmental potential of avian trunk neural crest cells in situ; Neuron; Vol. 3; No. 6; 755-766; 10.1016/0896-6273(89)90244-4
• Wetts, Richard and Serbedzija, George N., et el. (1989) Cell Lineage Analysis Reveals Multipotent Precursors in the Ciliary Margin of the Frog Retina; Developmental Biology; Vol. 136; No. 1; 254-263; 10.1016/0012-1606(89)90146-2
• Cameron, R. Andrew and Fraser, Scott E., et el. (1989) The oral-aboral axis of a sea urchin embryo is specified by first cleavage; Development; Vol. 106; No. 4; 641-647
• Serbedzija, George N. and Fraser, Scott E., et el. (1989) A vital dye analysis of the timing and pathways of avian trunk neural crest cell migration; Development; Vol. 106; No. 4; 809-816
• Cooper, Mark S. and Miller, John P., et el. (1989) Electrophoretic Repatterning of Charged Cytoplasmic Molecules within Tissues Coupled by Gap Junctions by Externally Applied Electric Fields; Developmental Biology; Vol. 132; No. 1; 179-188; 10.1016/0012-1606(89)90216-9
• O'Rourke, Nancy A. and Fraser, Scott E. (1989) Gradual Appearance of a Regulated Retinotectal Projection Pattern in Xenopus laevis; Developmental Biology; Vol. 132; No. 1; 251-265; 10.1016/0012-1606(89)90221-2
• Wetts, Richard and Fraser, Scott E. (1989) Slow intermixing of cells during Xenopus embryogenesis contributes to the consistency of the blastomere fate map; Development; Vol. 105; No. 1; 9-15
• Stollberg, Jes and Fraser, Scott E. (1988) Acetylcholine Receptors and Concanavalin A-Binding Sites on Cultured Xenopus Muscle Cells: Electrophoresis, Diffusion, and Aggregation; Journal of Cell Biology; Vol. 107; No. 4; 1397-1408; PMCID PMC2115237
• Bronner-Fraser, Marianne and Fraser, Scott E. (1988) Cell lineage analysis reveals multipotency of some avian neural crest cells; Nature; Vol. 335; No. 6186; 161-164; 10.1038/335161a0
• Fraser, Scott E. and Carhart, M. Scott, et el. (1988) Alterations in the Xenopus Retinotectal Projection by Antibodies to Xenopus N-CAM; Developmental Biology; Vol. 129; No. 1; 217-230; 10.1016/0012-1606(88)90176-5
• Bryant, Peter J. and Fraser, Scott E. (1988) Wound Healing, Cell Communication, and DNA Synthesis during lmaginal Disc Regeneration in Drosophila; Developmental Biology; Vol. 127; No. 1; 197-208; 10.1016/0012-1606(88)90201-1
• Krotoski, Danuta M. and Fraser, Scott E., et el. (1988) Mapping of Neural Crest Pathways in Xenopus laevis Using Inter- and Intra-specific Cell Markers; Developmental Biology; Vol. 127; No. 1; 119-132; 10.1016/0012-1606(88)90194-7
• Wetts, Richard and Fraser, S. E. (1988) Multipotent precursors can give rise to all major cell types of the frog retina; Science; Vol. 239; No. 4844; 1142-1145; 10.1126/science.2449732
• Bronner-Fraser, Marianne and Fraser, Scott E. (1988) Application of new technologies to studies of neural crest migration and differentiation; American Journal of Medical Genetics; Vol. 31; No. S1; 23-39; 10.1002/ajmg.1320310509
• Stern, Claudio D. and Fraser, Scott E., et el. (1988) A cell lineage analysis of segmentation in the chick embryo; Development; Vol. 104; No. S; 231-244
• Fraser, Scott and Green, Colin R., et el. (1987) Selective Disruption of Gap Junctional Communication Interferes with a Patterning Process in Hydra; Science; Vol. 237; No. 4810; 49-55; 10.1126/science.3037697
• Fraser, Scott E. and Hunt, R. Kevin (1986) A physiological measure of shifting connections in the Rana pipiens retinotectal system; Journal of Embryology and Experimental Morphology; Vol. 94; 149-161
• O'Rourke, Nancy A. and Fraser, Scott E. (1986) Pattern Regulation in the Eyebud of Xenopus Studied with a Vital-Dye Fiber-Tracing Technique; Developmental Biology; Vol. 114; No. 2; 277-288; 10.1016/0012-1606(86)90192-2
• O'Rourke, Nancy A. and Fraser, Scott E. (1986) Dynamic Aspects of Retinotectal Map Formation Revealed by a Vital-Dye Fiber-Tracing Technique; Developmental Biology; Vol. 114; No. 2; 265-276; 10.1016/0012-1606(86)90191-0
• O'Rourke, N. A. and Fraser, S. E. (1986) A vital-dye fiber-tracing technique to examine neuronal patterning and pattern regulation in the Xenopus eyebud; Progress in Clinical and Biological Research; Vol. 217B; 113-127
• Fraser, Scott E. and Bryant, Peter J. (1985) Patterns of dye coupling in the imaginal wing disk of Drosophila melanogaster; Nature; Vol. 317; No. 6037; 533-536; 10.1038/317533a0
• Fraser, Scott E. and Murray, Ben A., et el. (1984) Alteration of the retinotectal map in Xenopus by antibodies to neural cell adhesion molecules; Proceedings of the National Academy of Sciences of the United States of America; Vol. 81; No. 13; 4222-4226; PMCID PMC345401; 10.1073/pnas.81.13.4222
• Ide, Charles F. and Fraser, Scott E., et el. (1983) Eye dominance columns from an isogenic double-nasal frog eye; Science; Vol. 221; No. 4607; 293-295; 10.1126/science.6857287
• Fraser, Scott E. (1983) Fiber Optic Mapping of the Xenopus Visual System: Shift in the Retinotectal Projection during Development; Developmental Biology; Vol. 95; No. 2; 505-511; 10.1016/0012-1606(83)90053-2
• Fraser, Scott E. and Bode, Hans R. (1981) Epithelial cells of Hydra are dye-coupled; Nature; Vol. 294; No. 5839; 356-358; 10.1038/294356a0
• Fraser, Scott E. and Hunt, R. K. (1980) Retinotectal Plasticity in Xenopus: Anomalous lpsilateral Projection following Late Larval Eye Removal; Developmental Biology; Vol. 79; No. 2; 444-452; 10.1016/0012-1606(80)90129-3
• Fraser, Scott E. (1980) A Differential Adhesion Approach to the Patterning of Nerve Connections; Developmental Biology; Vol. 79; No. 2; 453-464; 10.1016/0012-1606(80)90130-X
• Fraser, Scott E. and Hunt, R. Kevin (1980) Retinotectal Specificity: Models and Experiments in Search of a Mapping Function; Annual Review of Neuroscience; Vol. 3; No. 1; 319-352; 10.1146/annurev.ne.03.030180.001535