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    year = "2024",
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    id = "record",
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    url = "https://authors.library.caltech.edu/records/8b5yj-sjn05",
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    doi = "10.1101/2024.03.13.584179",
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    title = "Immediate responses to ambient light in vivo reveal distinct subpopulations of suprachiasmatic VIP neurons",
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    title = "Adeno-associated viral vectors for functional intravenous gene transfer throughout the non-human primate brain",
    journal = "Nature Nanotechnology",
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    url = "https://resolver.caltech.edu/CaltechAUTHORS:20230725-857203000.51",
    id = "record",
    issn = "1748-3387",
    doi = "10.1038/s41565-023-01419-x",
    volume = "18",
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    journal = "Nanomedicine",
    year = "2023",
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    title = "Spatial transcriptomics for profiling the tropism of viral vectors in tissues",
    journal = "Nature Biotechnology",
    year = "2023",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20230301-701033500.22",
    id = "record",
    issn = "1087-0156",
    doi = "10.1038/s41587-022-01648-w",
    volume = "41",
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    title = "Functional gene delivery to and across brain vasculature of systemic AAVs with endothelial-specific tropism in rodents and broad tropism in primates",
    journal = "Nature Communications",
    year = "2023",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20230615-129198000.12",
    id = "record",
    issn = "2041-1723",
    doi = "10.1038/s41467-023-38582-7",
    volume = "14",
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    title = "Spatial tropism profiling of AAV vectors by ultrasensitive sequential FISH in tissue",
    journal = "Nature Biotechnology",
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    url = "https://resolver.caltech.edu/CaltechAUTHORS:20230221-20005500.75",
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    issn = "1087-0156",
    doi = "10.1038/s41587-023-01681-3",
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    title = "Primate-conserved carbonic anhydrase IV and murine-restricted LY6C1 enable blood-brain barrier crossing by engineered viral vectors",
    journal = "Science Advances",
    year = "2023",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20230602-251993000.57",
    id = "record",
    issn = "2375-2548",
    doi = "10.1126/sciadv.adg6618",
    volume = "9",
    pmcid = "PMC10115422"
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    title = "Advances in AAV technology for delivering genetically encoded cargo to the nonhuman primate nervous system",
    journal = "Current Research in Neurobiology",
    year = "2023",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20230725-706045000.29",
    id = "record",
    issn = "2665-945X",
    doi = "10.1016/j.crneur.2023.100086",
    volume = "4",
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    title = "CRISPR-clear imaging of melanin-rich B16-derived solid tumors",
    journal = "Communications Biology",
    year = "2023",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20230525-772152300.6",
    id = "record",
    issn = "2399-3642",
    doi = "10.1038/s42003-023-04614-7",
    volume = "6",
    pmcid = "PMC10073193"
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    title = "Primate-conserved Carbonic Anhydrase IV and murine-restricted Ly6c1 are new targets for crossing the blood-brain barrier",
    year = "2023",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20230316-182564000.42",
    id = "record",
    doi = "10.1101/2023.01.12.523632"
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    year = "2023",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20230316-182523000.38",
    id = "record",
    doi = "10.1101/2023.01.11.523680"
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    year = "2023",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20230316-182562000.41",
    id = "record",
    doi = "10.1101/2023.01.12.523844"
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    title = "Dysregulated mammalian estrus cycle rescued by timed activation of VIP neurons in the circadian pacemaker and late afternoon light exposure",
    year = "2023",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20230316-182503000.37",
    id = "record",
    doi = "10.1101/2023.01.14.524075"
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    title = "A prebiotic diet modulates microglial states and motor deficits in α-synuclein overexpressing mice",
    journal = "eLife",
    year = "2022",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20221202-906989500.8",
    id = "record",
    issn = "2050-084X",
    doi = "10.7554/elife.81453",
    volume = "11",
    pmcid = "PMC9668333"
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    title = "Molecular basis of astrocyte diversity and morphology across the CNS in health and disease",
    journal = "Science",
    year = "2022",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20221209-478595000.5",
    id = "record",
    issn = "0036-8075",
    doi = "10.1126/science.adc9020",
    volume = "378"
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    title = "Targeting the lung epithelium after intravenous delivery by directed evolution of underexplored sites on the AAV capsid",
    journal = "Molecular Therapy - Methods \& Clinical Development",
    year = "2022",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20220816-373601000",
    id = "record",
    issn = "2329-0501",
    doi = "10.1016/j.omtm.2022.07.010",
    volume = "26",
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    title = "Structural basis of receptor usage by the engineered capsid AAV-PHP.eB",
    journal = "Molecular Therapy - Methods \& Clinical Development",
    year = "2022",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20220801-544880000",
    id = "record",
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    doi = "10.1016/j.omtm.2022.07.011",
    volume = "26",
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    title = "Multimodal imaging of capsid and cargo reveals differential brain targeting and liver detargeting of systemically-administered AAVs",
    journal = "Biomaterials",
    year = "2022",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20221116-602375500.16",
    id = "record",
    issn = "0142-9612",
    doi = "10.1016/j.biomaterials.2022.121701",
    volume = "288",
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    title = "Engineered AAVs for non-invasive gene delivery to rodent and non-human primate nervous systems",
    journal = "Neuron",
    year = "2022",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20220606-735990000",
    id = "record",
    issn = "0896-6273",
    doi = "10.1016/j.neuron.2022.05.003",
    volume = "110",
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    title = "A prebiotic diet modulates microglial states and motor deficits in α-synuclein overexpressing mice",
    year = "2022",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20220706-965670000",
    id = "record",
    doi = "10.1101/2022.06.27.497828"
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    title = "Adeno-Associated Virus Toolkit to Target Diverse Brain Cells",
    journal = "Annual Review of Neuroscience",
    year = "2022",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20220525-90416000",
    id = "record",
    issn = "0147-006X",
    doi = "10.1146/annurev-neuro-111020-100834",
    volume = "45"
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    title = "Age-dependent alterations in key components of the nigrostriatal dopaminergic system and distinct motor phenotypes",
    journal = "Acta Pharmacologica Sinica",
    year = "2022",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20210709-224144084",
    id = "record",
    issn = "1671-4083",
    doi = "10.1038/s41401-021-00713-5",
    volume = "43",
    pmcid = "PMC8975991"
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    title = "Glutamate in primary afferents is required for itch transmission",
    journal = "Neuron",
    year = "2022",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20220104-157923000",
    id = "record",
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    doi = "10.1016/j.neuron.2021.12.007",
    volume = "110",
    pmcid = "PMC8898340"
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    title = "Brain-wide Cas9-mediated cleavage of a gene causing familial Alzheimer's disease alleviates amyloid-related pathologies in mice",
    journal = "Nature Biomedical Engineering",
    year = "2022",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20210728-223917563",
    id = "record",
    issn = "2157-846X",
    doi = "10.1038/s41551-021-00759-0",
    volume = "6"
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    year = "2022",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20220111-302458000",
    id = "record",
    doi = "10.1101/2022.01.08.475342"
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    year = "2022",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20220104-249193900",
    id = "record",
    doi = "10.1101/2021.12.29.474408"
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    title = "AAV capsid variants with brain-wide transgene expression and decreased liver targeting after intravenous delivery in mouse and marmoset",
    journal = "Nature Neuroscience",
    year = "2021",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20211210-240709000",
    id = "record",
    issn = "1097-6256",
    doi = "10.1038/s41593-021-00969-4",
    volume = "25"
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    title = "Deep Parallel Characterization of AAV Tropism and AAV-Mediated Transcriptional Changes via Single-Cell RNA Sequencing",
    journal = "Frontiers in Immunology",
    year = "2021",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20210629-153450418",
    id = "record",
    issn = "1664-3224",
    doi = "10.3389/fimmu.2021.730825",
    volume = "12",
    pmcid = "PMC8574206"
}


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    title = "Improved systemic AAV gene therapy with a neurotrophic capsid in Niemann–Pick disease type C1 mice",
    journal = "Life Science Alliance",
    year = "2021",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20210930-210049351",
    id = "record",
    issn = "2575-1077",
    doi = "10.26508/lsa.202101040",
    volume = "4",
    pmcid = "PMC8380657"
}


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    title = "Light-guided sectioning for precise in situ localization and tissue interface analysis for brain-implanted optical fibers and GRIN lenses",
    journal = "Cell Reports",
    year = "2021",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20211008-224633454",
    id = "record",
    issn = "2211-1247",
    doi = "10.1016/j.celrep.2021.109744",
    volume = "36",
    pmcid = "PMC8552649"
}


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    title = "Human embryo polarization requires PLC signaling to mediate trophectoderm specification",
    journal = "eLife",
    year = "2021",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20200925-104734056",
    id = "record",
    issn = "2050-084X",
    doi = "10.7554/eLife.65068",
    volume = "10"
}


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    title = "Specific and behaviorally consequential astrocyte G\_q GPCR signaling attenuation in vivo with iβARK",
    journal = "Neuron",
    year = "2021",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20210625-220915439",
    id = "record",
    issn = "0896-6273",
    doi = "10.1016/j.neuron.2021.05.023",
    volume = "109",
    pmcid = "PMC8418870"
}


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    title = "Microbiota regulate social behaviour via stress response neurons in the brain",
    journal = "Nature",
    year = "2021",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20210706-202344110",
    id = "record",
    issn = "0028-0836",
    doi = "10.1038/s41586-021-03669-y",
    volume = "595",
    pmcid = "PMC8346519"
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    title = "The SHREAD gene therapy platform for paracrine delivery improves tumor localization and intratumoral effects of a clinical antibody",
    journal = "Proceedings of the National Academy of Sciences of the United States of America",
    year = "2021",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20210519-141318892",
    id = "record",
    issn = "0027-8424",
    doi = "10.1073/pnas.2017925118",
    volume = "118",
    pmcid = "PMC8166199"
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@article{https://resolver.caltech.edu/CaltechAUTHORS:20210629-201655221,
    title = "Use of high-content imaging to quantify transduction of AAV-PHP viruses in the brain following systemic delivery",
    journal = "Brain Communications",
    year = "2021",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20210629-201655221",
    id = "record",
    issn = "2632-1297",
    doi = "10.1093/braincomms/fcab105",
    volume = "3",
    pmcid = "PMC8200048"
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    title = "Enhancer viruses for combinatorial cell-subclass-specific labeling",
    journal = "Neuron",
    year = "2021",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20200421-092814882",
    id = "record",
    issn = "0896-6273",
    doi = "10.1016/j.neuron.2021.03.011",
    volume = "109",
    pmcid = "PMC8610077"
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    title = "Deep Tropism Profiling of Barcoded AAV Capsid and Cargo Pools in Intact Tissue Using High-Throughput Ultrasensitive Sequential FISH",
    journal = "Molecular Therapy",
    year = "2021",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20210527-161220137",
    id = "record",
    issn = "1525-0016",
    doi = "10.1016/j.ymthe.2021.04.019",
    volume = "29"
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    title = "Endothelial-Tropic AAVs for Genetic Access to Whole-Brain Vasculature in Wild-Type Mouse Strains Following Non-Invasive
 Systemic Delivery",
    journal = "Molecular Therapy",
    year = "2021",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20210528-081450340",
    id = "record",
    issn = "1525-0016",
    doi = "10.1016/j.ymthe.2021.04.019",
    volume = "29"
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    title = "Targeted Gene Therapy with Engineered Systemic AAVs for the Central and Peripheral Nervous Systems Prevents Motor Coordination Phenotypes in a Mouse Model of Friedreich's Ataxia",
    journal = "Molecular Therapy",
    year = "2021",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20210528-082042148",
    id = "record",
    issn = "1525-0016",
    doi = "10.1016/j.ymthe.2021.04.019",
    volume = "29"
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    title = "Simultaneous Detection of AAV Genome, Transcript, and Protein Localization in Intact Cells and Tissues at High Resolution",
    journal = "Molecular Therapy",
    year = "2021",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20210527-160526973",
    id = "record",
    issn = "1525-0016",
    doi = "10.1016/j.ymthe.2021.04.019",
    volume = "29"
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    title = "Cholinergic neurons constitutively engage the ISR for dopamine modulation and skill learning in mice",
    journal = "Science",
    year = "2021",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20210428-094505098",
    id = "record",
    issn = "0036-8075",
    doi = "10.1126/science.abe1931",
    volume = "372",
    pmcid = "PMC8457366"
}


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    title = "Neuronal Activation of the Gastrointestinal Tract Shapes the Gut Environment in Mice",
    year = "2021",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20210414-072514678",
    id = "record",
    doi = "10.1101/2021.04.12.439539"
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    title = "Functional enhancer elements drive subclass-selective expression from mouse to primate neocortex",
    journal = "Cell Reports",
    year = "2021",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20200421-093728277",
    id = "record",
    issn = "2211-1247",
    doi = "10.1016/j.celrep.2021.108754",
    volume = "34"
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    title = "Dorsal Raphe Dopamine Neurons Signal Motivational Salience Dependent on Internal State, Expectation, and Behavioral Context",
    journal = "Journal of Neuroscience",
    year = "2021",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20200728-094010838",
    id = "record",
    issn = "0270-6474",
    doi = "10.1523/JNEUROSCI.2690-20.2021",
    volume = "41",
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    title = "Directed Evolution of a Selective and Sensitive Serotonin Sensor via Machine Learning",
    journal = "Cell",
    year = "2020",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20201217-143607354",
    id = "record",
    issn = "0092-8674",
    doi = "10.1016/j.cell.2020.11.040",
    volume = "183",
    pmcid = "PMC8025677"
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    title = "Negative feedback control of neuronal activity by microglia",
    journal = "Nature",
    year = "2020",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20200817-140210217",
    id = "record",
    issn = "0028-0836",
    doi = "10.1038/s41586-020-2777-8",
    volume = "586"
}


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    title = "Expanding the brain researcher's toolkit",
    journal = "Science",
    year = "2020",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20200810-121624161",
    id = "record",
    issn = "0036-8075",
    doi = "10.1126/science.abd2660",
    volume = "369"
}


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    year = "2020",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20200626-103613335",
    id = "record",
    doi = "10.1101/2020.06.16.152975"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20200121-141523675,
    title = "Multiplexed Cre-dependent selection yields systemic AAVs for targeting distinct brain cell types",
    journal = "Nature Methods",
    year = "2020",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20200121-141523675",
    id = "record",
    issn = "1548-7091",
    doi = "10.1038/s41592-020-0799-7",
    volume = "17",
    pmcid = "PMC7219404"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20200504-132509459,
    title = "Positron emission tomography imaging of novel AAV capsids maps rapid brain accumulation",
    journal = "Nature Communications",
    year = "2020",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20200504-132509459",
    id = "record",
    issn = "2041-1723",
    doi = "10.1038/s41467-020-15818-4",
    volume = "11",
    pmcid = "PMC7193641"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20200604-074008042,
    title = "Method for High-Throughput, In Situ Characterization of AAV Variant Pools in Intact Tissue Using Ultrasensitive Sequential FISH",
    journal = "Molecular Therapy",
    year = "2020",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20200604-074008042",
    id = "record",
    issn = "1525-0016",
    doi = "10.1016/j.ymthe.2020.04.019",
    volume = "28"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20200604-073642424,
    title = "Targeting the Rodent Peripheral Nervous System Efficiently and with Greater Specificity through Intravenous Delivery of AAV Capsids Evolved by Multiplexed-CREATE",
    journal = "Molecular Therapy",
    year = "2020",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20200604-073642424",
    id = "record",
    issn = "1525-0016",
    doi = "10.1016/j.ymthe.2020.04.019",
    volume = "28"
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@article{https://resolver.caltech.edu/CaltechAUTHORS:20200604-083821035,
    title = "Evolution and Investigation of Engineered AAV Capsids Exhibiting Enhanced Transduction of the Central Nervous System with or without Murine Strain Specificity",
    journal = "Molecular Therapy",
    year = "2020",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20200604-083821035",
    id = "record",
    issn = "1525-0016",
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@article{https://resolver.caltech.edu/CaltechAUTHORS:20200604-094818518,
    title = "Recombinant AAVs Target Custom Frataxin Therapeutic Cassettes to Tissues of Pathophysiologic Relevance in Friedreich's  Ataxia",
    journal = "Molecular Therapy",
    year = "2020",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20200604-094818518",
    id = "record",
    issn = "1525-0016",
    doi = "10.1016/j.ymthe.2020.04.019",
    volume = "28"
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@article{https://resolver.caltech.edu/CaltechAUTHORS:20200604-073231089,
    title = "Cloud-based Software for NGS Data Management and Analysis for Directed Evolution of Peptide-Based Delivery Vectors",
    journal = "Molecular Therapy",
    year = "2020",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20200604-073231089",
    id = "record",
    issn = "1525-0016",
    doi = "10.1016/j.ymthe.2020.04.019",
    volume = "28"
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@article{https://resolver.caltech.edu/CaltechAUTHORS:20200604-134728909,
    title = "Building a Toolbox of Compact Enhancers for Cell Type-Specific Gene Expression from AAVs in the Primate Brain",
    journal = "Molecular Therapy",
    year = "2020",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20200604-134728909",
    id = "record",
    issn = "1525-0016",
    doi = "10.1016/j.ymthe.2020.04.019",
    volume = "28"
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@article{https://resolver.caltech.edu/CaltechAUTHORS:20200604-075354300,
    title = "In-Depth Parallel Profiling of Tissue and Cell-Type Tropism of AAV Variants by Single-Cell RNA Sequencing",
    journal = "Molecular Therapy",
    year = "2020",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20200604-075354300",
    id = "record",
    issn = "1525-0016",
    doi = "10.1016/j.ymthe.2020.04.019",
    volume = "28"
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@article{https://resolver.caltech.edu/CaltechAUTHORS:20200604-154158513,
    title = "Transduction Profiles of Engineered Adeno-Associated Viral Capsids in Mouse and Marmoset",
    journal = "Molecular Therapy",
    year = "2020",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20200604-154158513",
    id = "record",
    issn = "1525-0016",
    doi = "10.1016/j.ymthe.2020.04.019",
    volume = "28"
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@article{https://resolver.caltech.edu/CaltechAUTHORS:20200604-102237108,
    title = "A Computational and Experimental Platform for Detecting Full Transcriptome Cell Type Tropism of Lowly Expressed Barcoded and Pooled AAV Variants via Single-Cell RNA Sequencing",
    journal = "Molecular Therapy",
    year = "2020",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20200604-102237108",
    id = "record",
    issn = "1525-0016",
    doi = "10.1016/j.ymthe.2020.04.019",
    volume = "28"
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@article{https://resolver.caltech.edu/CaltechAUTHORS:20200604-072416648,
    title = "Structure-Guided Rational Design of Adeno-Associated Viral Capsids with Expanded Sizes",
    journal = "Molecular Therapy",
    year = "2020",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20200604-072416648",
    id = "record",
    issn = "1525-0016",
    doi = "10.1016/j.ymthe.2020.04.019",
    volume = "28"
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@article{https://resolver.caltech.edu/CaltechAUTHORS:20200220-151529138,
    title = "LRP1 is a master regulator of tau uptake and spread",
    journal = "Nature",
    year = "2020",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20200220-151529138",
    id = "record",
    issn = "0028-0836",
    doi = "10.1038/s41586-020-2156-5",
    volume = "580"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20190220-102621411,
    title = "RecV recombinase system for in vivo targeted optogenomic modifications of single cells or cell populations",
    journal = "Nature Methods",
    year = "2020",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20190220-102621411",
    id = "record",
    issn = "1548-7091",
    doi = "10.1038/s41592-020-0774-3",
    volume = "17",
    pmcid = "PMC7135964"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20191209-154036633,
    title = "Gut-seeded α-synuclein fibrils promote gut dysfunction and brain pathology specifically in aged mice",
    journal = "Nature Neuroscience",
    year = "2020",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20191209-154036633",
    id = "record",
    issn = "1097-6256",
    doi = "10.1038/s41593-020-0589-7",
    volume = "23",
    pmcid = "PMC7065967"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20200218-134259315,
    title = "A gut bacterial amyloid promotes α-synuclein aggregation and motor impairment in mice",
    journal = "eLife",
    year = "2020",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20200218-134259315",
    id = "record",
    issn = "2050-084X",
    doi = "10.7554/elife.53111",
    volume = "9",
    pmcid = "PMC7012599"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20200106-082556970,
    title = "Tissue clearing and its applications in neuroscience",
    journal = "Nature Reviews. Neuroscience",
    year = "2020",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20200106-082556970",
    id = "record",
    issn = "1471-003X",
    doi = "10.1038/s41583-019-0250-1",
    volume = "21",
    pmcid = "PMC8121164"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20191203-132507070,
    title = "Low- and high-thermogenic brown adipocyte subpopulations coexist in murine adipose tissue",
    journal = "Journal of Clinical Investigation",
    year = "2020",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20191203-132507070",
    id = "record",
    issn = "0021-9738",
    doi = "10.1172/jci129167",
    volume = "130",
    pmcid = "PMC6934193"
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@article{https://resolver.caltech.edu/CaltechAUTHORS:20190801-132221928,
    title = "Imaging neuromodulators with high spatiotemporal resolution using genetically encoded indicators",
    journal = "Nature Protocols",
    year = "2019",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20190801-132221928",
    id = "record",
    issn = "1754-2189",
    doi = "10.1038/s41596-019-0239-2",
    volume = "14"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20191216-134424777,
    title = "Paracrine delivery of therapeutic biologics for cancer",
    journal = "Human Gene Therapy",
    year = "2019",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20191216-134424777",
    id = "record",
    issn = "1043-0342",
    doi = "10.1089/hum.2019.29095.abstracts",
    volume = "30"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20190304-085432637,
    title = "Machine learning-guided channelrhodopsin engineering enables minimally-invasive optogenetics",
    journal = "Nature Methods",
    year = "2019",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20190304-085432637",
    id = "record",
    issn = "1548-7091",
    doi = "10.1038/s41592-019-0583-8",
    volume = "16",
    pmcid = "PMC6858556"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20190930-133756080,
    title = "Optical dopamine monitoring with dLight1 reveals mesolimbic phenotypes in a mouse model of neurofibromatosis type 1",
    journal = "eLife",
    year = "2019",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20190930-133756080",
    id = "record",
    issn = "2050-084X",
    doi = "10.7554/elife.48983",
    volume = "8",
    pmcid = "PMC6819083"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20190926-135813898,
    title = "Proceedings of the Sixth Deep Brain Stimulation Think Tank Modulation of Brain Networks and Application of Advanced Neuroimaging, Neurophysiology, and Optogenetics",
    journal = "Frontiers in Neuroscience",
    year = "2019",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20190926-135813898",
    id = "record",
    issn = "1662-453X",
    doi = "10.3389/fnins.2019.00936",
    volume = "13",
    pmcid = "PMC6751331"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20191017-140230343,
    title = "Structural Studies of Engineered Adeno-Associated Virus Capsids that Cross Blood-Brain Barrier Efficiently",
    journal = "Protein Science",
    year = "2019",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20191017-140230343",
    id = "record",
    issn = "0961-8368",
    doi = "10.1002/pro.3710",
    volume = "28"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20190624-113552525,
    title = "The Serotonergic Raphe Promote Sleep in Zebrafish and Mice",
    journal = "Neuron",
    year = "2019",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20190624-113552525",
    id = "record",
    issn = "0896-6273",
    doi = "10.1016/j.neuron.2019.05.038",
    volume = "103",
    pmcid = "PMC6706304"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20181107-092306925,
    title = "Identification of peripheral neural circuits that regulate heart rate using optogenetic and viral vector strategies",
    journal = "Nature Communications",
    year = "2019",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20181107-092306925",
    id = "record",
    issn = "2041-1723",
    doi = "10.1038/s41467-019-09770-1",
    volume = "10",
    pmcid = "PMC6486614"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20190503-152305499,
    title = "Multiplexed-CREATE Selection Yields AAV Vectors Targeting Different Cell Types of the Central Nervous System Following Systemic Delivery",
    journal = "Molecular Therapy",
    year = "2019",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20190503-152305499",
    id = "record",
    issn = "1525-0016",
    doi = "10.1016/j.ymthe.2019.04.004",
    volume = "27"
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@article{https://resolver.caltech.edu/CaltechAUTHORS:20190502-130505856,
    title = "Engineered AAVs for Enhanced Transduction of Submucosal Cells within the Lung Following Intravenous Delivery",
    journal = "Molecular Therapy",
    year = "2019",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20190502-130505856",
    id = "record",
    issn = "1525-0016",
    doi = "10.1016/j.ymthe.2019.04.004",
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@article{https://resolver.caltech.edu/CaltechAUTHORS:20190502-130921368,
    title = "Engineered AAVS for CNS Transduction and Peripheral Organ De-Targeting across Species after Systemic Delivery",
    journal = "Molecular Therapy",
    year = "2019",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20190502-130921368",
    id = "record",
    issn = "1525-0016",
    doi = "10.1016/j.ymthe.2019.04.004",
    volume = "27"
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    title = "TRIM9-Mediated Resolution of Neuroinflammation Confers Neuroprotection upon Ischemic Stroke in Mice",
    journal = "Cell Reports",
    year = "2019",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20190409-100816489",
    id = "record",
    issn = "2211-1247",
    doi = "10.1016/j.celrep.2018.12.055",
    volume = "27",
    pmcid = "PMC6485958"
}


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    title = "High Contrast Metastructures VIII",
    chapter = "Double-wavelength metasurface objective lens for two-photon microscopy (Conference Presentation)",
    year = "2019",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20190822-134054530",
    id = "record",
    isbn = "9781510624986",
    doi = "10.1117/12.2510596"
}


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    title = "Epigenetic landscape and AAV targeting of human neocortical cell classes",
    year = "2019",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20190220-101926873",
    id = "record",
    doi = "10.1101/555318"
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    title = "Systemic AAV vectors for widespread and targeted gene delivery in rodents",
    journal = "Nature Protocols",
    year = "2019",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20180816-125507808",
    id = "record",
    issn = "1754-2189",
    doi = "10.1038/s41596-018-0097-3",
    volume = "14"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20181105-084438080,
    title = "Whole-Brain Analysis of Cells and Circuits by Tissue Clearing and Light-Sheet Microscopy",
    journal = "Journal of Neuroscience",
    year = "2018",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20181105-084438080",
    id = "record",
    issn = "0270-6474",
    doi = "10.1523/jneurosci.1677-18.2018",
    volume = "38",
    pmcid = "PMC6706004"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20180717-145659939,
    title = "Two-photon microscopy with a double-wavelength metasurface objective lens",
    journal = "Nano Letters",
    year = "2018",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20180717-145659939",
    id = "record",
    issn = "1530-6984",
    doi = "10.1021/acs.nanolett.8b01737",
    volume = "18"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20180507-085656725,
    title = "Viral Strategies for Targeting the Central and Peripheral Nervous Systems",
    journal = "Annual Review of Neuroscience",
    year = "2018",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20180507-085656725",
    id = "record",
    issn = "0147-006X",
    doi = "10.1146/annurev-neuro-080317-062048",
    volume = "41"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20180601-103720713,
    title = "Ultrafast neuronal imaging of dopamine dynamics with designed genetically encoded sensors",
    journal = "Science",
    year = "2018",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20180601-103720713",
    id = "record",
    issn = "0036-8075",
    doi = "10.1126/science.aat4422",
    volume = "360",
    pmcid = "PMC6287765"
}


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    title = "The Neuropeptide Tac2 Controls a Distributed Brain State Induced by Chronic Social Isolation Stress",
    journal = "Cell",
    year = "2018",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20180518-105323206",
    id = "record",
    issn = "0092-8674",
    doi = "10.1016/j.cell.2018.03.037",
    volume = "173",
    pmcid = "PMC5967263"
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@article{https://resolver.caltech.edu/CaltechAUTHORS:20180706-160530988,
    title = "Developing AAV Vectors for More Efficient and Selective Gene Expression in Specific Cell Types of the Nervous System Following Systemic Delivery",
    journal = "Molecular Therapy",
    year = "2018",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20180706-160530988",
    id = "record",
    issn = "1525-0016",
    doi = "10.1016/j.ymthe.2018.05.001",
    volume = "26"
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@article{https://resolver.caltech.edu/CaltechAUTHORS:20180529-083813817,
    title = "Hydrogel-Tissue Chemistry: Principles and Applications",
    journal = "Annual Review of Biophysics",
    year = "2018",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20180529-083813817",
    id = "record",
    issn = "1936-122X",
    doi = "10.1146/annurev-biophys-070317-032905",
    volume = "47",
    pmcid = "PMC6359929"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20180706-154255761,
    title = "Enhanced Efficacy of Gene Therapy Treatment for Niemann-Pick C1 Disease Using a Novel Serotype, AAV-PHP.B",
    journal = "Molecular Therapy",
    year = "2018",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20180706-154255761",
    id = "record",
    issn = "1525-0016",
    doi = "10.1016/j.ymthe.2018.05.001",
    volume = "26"
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@article{https://resolver.caltech.edu/CaltechAUTHORS:20180706-151207096,
    title = "Engineering Cell Type Specific Delivery Vectors for Noninvasive Modulation of Brain Circuits and Behaviors",
    journal = "Molecular Therapy",
    year = "2018",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20180706-151207096",
    id = "record",
    issn = "1525-0016",
    doi = "10.1016/j.ymthe.2018.05.001",
    volume = "26"
}


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    title = "Adaptive Optics and Wavefront Control for Biological Systems IV",
    chapter = "Time-reversed ultrasonically encoded (TRUE) focusing for deep-tissue optogenetic modulation",
    year = "2018",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20180711-103004538",
    id = "record",
    isbn = "9781510614895",
    doi = "10.1117/12.2288331"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20170918-075519928,
    title = "Dopaminergic dysfunction in neurodevelopmental disorders: recent advances and synergistic technologies to aid basic research",
    journal = "Current Opinion in Neurobiology",
    year = "2018",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20170918-075519928",
    id = "record",
    issn = "0959-4388",
    doi = "10.1016/j.conb.2017.08.003",
    volume = "48",
    pmcid = "PMC5825239"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20180301-095437009,
    title = "Gene therapy for the treatment of Niemann-Pick disease type C1: Comparison of AAV9 to a novel serotype, AAV-PHP.B",
    journal = "Molecular Genetics and Metabolism",
    year = "2018",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20180301-095437009",
    id = "record",
    issn = "1096-7192",
    doi = "10.1016/j.ymgme.2017.12.075",
    volume = "123"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20171107-132336726,
    title = "Deep tissue optical focusing and optogenetic modulation with time-reversed ultrasonically encoded light",
    journal = "Science Advances",
    year = "2017",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20171107-132336726",
    id = "record",
    issn = "2375-2548",
    doi = "10.1126/sciadv.aao5520",
    volume = "3",
    pmcid = "PMC5722648"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20180108-144650592,
    title = "Bone CLARITY reveals that anti-sclerostin antibody penetrates the lacunar canalicular system in mice under physiological loading conditions",
    journal = "Journal of Bone and Mineral Research",
    year = "2017",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20180108-144650592",
    id = "record",
    issn = "0884-0431",
    doi = "10.1002/jbmr.3363",
    volume = "32"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20171127-142458372,
    title = "Overriding sleep",
    journal = "Science",
    year = "2017",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20171127-142458372",
    id = "record",
    issn = "0036-8075",
    doi = "10.1126/science.aap9535",
    volume = "358"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20171030-140148566,
    title = "Machine learning to design integral membrane channelrhodopsins for efficient eukaryotic expression and plasma membrane localization",
    journal = "PLOS Computational Biology",
    year = "2017",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20171030-140148566",
    id = "record",
    issn = "1553-7358",
    doi = "10.1371/journal.pcbi.1005786",
    volume = "13",
    pmcid = "PMC5695628"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20170921-075913502,
    title = "The Jellyfish Cassiopea Exhibits a Sleep-like State",
    journal = "Current Biology",
    year = "2017",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20170921-075913502",
    id = "record",
    issn = "0960-9822",
    doi = "10.1016/j.cub.2017.08.014",
    volume = "27",
    pmcid = "PMC5653286"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20170926-130537624,
    title = "Q\&A: How can advances in tissue clearing and optogenetics contribute to our understanding of normal and diseased biology?",
    journal = "BMC Biology",
    year = "2017",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20170926-130537624",
    id = "record",
    issn = "1741-7007",
    doi = "10.1186/s12915-017-0421-3",
    volume = "15",
    pmcid = "PMC5613628"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20170626-152125765,
    title = "Engineered AAVs for efficient noninvasive gene delivery to the central and peripheral nervous systems",
    journal = "Nature Neuroscience",
    year = "2017",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20170626-152125765",
    id = "record",
    issn = "1097-6256",
    doi = "10.1038/nn.4593",
    volume = "20",
    pmcid = "PMC5529245"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20170609-094413808,
    title = "Dorsal Raphe Dopamine Neurons Modulate Arousal and Promote Wakefulness by Salient Stimuli",
    journal = "Neuron",
    year = "2017",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20170609-094413808",
    id = "record",
    issn = "0896-6273",
    doi = "10.1016/j.neuron.2017.05.020",
    volume = "94"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20170522-103736207,
    title = "Global Representations of Goal-Directed Behavior in Distinct Cell Types of Mouse Neocortex",
    journal = "Neuron",
    year = "2017",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20170522-103736207",
    id = "record",
    issn = "0896-6273",
    doi = "10.1016/j.neuron.2017.04.017",
    volume = "94",
    pmcid = "PMC5723385"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20170601-080728015,
    title = "Adeno-Associated Viral Gene Therapy Using PHP.B:NPC1 Ameliorates Disease Phenotype in Mouse Model of Niemann-Pick C1 Disease",
    journal = "Molecular Therapy",
    year = "2017",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20170601-080728015",
    id = "record",
    issn = "1525-0016",
    doi = "10.1016/j.ymthe.2017.04.025",
    volume = "25"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20161221-135116035,
    title = "Bone CLARITY: Clearing, imaging, and computational analysis of osteoprogenitors within intact bone marrow",
    journal = "Science Translational Medicine",
    year = "2017",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20161221-135116035",
    id = "record",
    issn = "1946-6234",
    doi = "10.1126/scitranslmed.aah6518",
    volume = "9"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20170310-130542741,
    title = "Structure-guided SCHEMA recombination generates diverse chimeric channelrhodopsins",
    journal = "Proceedings of the National Academy of Sciences of the United States of America",
    year = "2017",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20170310-130542741",
    id = "record",
    issn = "0027-8424",
    doi = "10.1073/pnas.1700269114",
    volume = "114",
    pmcid = "PMC5380088"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20170307-082231020,
    title = "Directed Evolution of a Bright Near-Infrared Fluorescent Rhodopsin Using a Synthetic Chromophore",
    journal = "Cell Chemical Biology",
    year = "2017",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20170307-082231020",
    id = "record",
    issn = "2451-9456",
    doi = "10.1016/j.chembiol.2017.02.008",
    volume = "24",
    pmcid = "PMC5357175"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20161115-114016210,
    title = "Gut Microbiota Regulate Motor Deficits and Neuroinflammation in a Model of Parkinson's Disease",
    journal = "Cell",
    year = "2016",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20161115-114016210",
    id = "record",
    issn = "0092-8674",
    doi = "10.1016/j.cell.2016.11.018",
    volume = "167",
    pmcid = "PMC5718049"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20161128-093036959,
    title = "Global Collaboration, Learning from Other Fields",
    journal = "Neuron",
    year = "2016",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20161128-093036959",
    id = "record",
    issn = "0896-6273",
    doi = "10.1016/j.neuron.2016.10.040",
    volume = "92"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20160920-092113773,
    title = "Regional glutamine deficiency in tumours promotes dedifferentiation through inhibition of histone demethylation",
    journal = "Nature Cell Biology",
    year = "2016",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20160920-092113773",
    id = "record",
    issn = "1465-7392",
    doi = "10.1038/ncb3410",
    volume = "18",
    pmcid = "PMC5536113"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20160927-144217261,
    title = "Exposing the Three-Dimensional Biogeography and Metabolic States of Pathogens in Cystic Fibrosis Sputum via Hydrogel Embedding, Clearing, and rRNA Labeling",
    journal = "mBio",
    year = "2016",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20160927-144217261",
    id = "record",
    issn = "2150-7511",
    doi = "10.1128/mBio.00796-16",
    volume = "7",
    pmcid = "PMC5040109"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20160628-085406782,
    title = "Single-molecule RNA detection at depth via hybridization chain reaction and tissue hydrogel embedding and clearing",
    journal = "Development",
    year = "2016",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20160628-085406782",
    id = "record",
    issn = "0950-1991",
    doi = "10.1242/dev.138560",
    volume = "143",
    pmcid = "PMC5004914"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20160712-101339180,
    title = "Extracting structural and functional features of widely distributed biological circuits with single cell resolution via tissue clearing and delivery vectors",
    journal = "Current Opinion in Biotechnology",
    year = "2016",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20160712-101339180",
    id = "record",
    issn = "0958-1669",
    doi = "10.1016/j.copbio.2016.03.012",
    volume = "40",
    pmcid = "PMC4975678"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20160527-092723542,
    title = "Using Cre-Dependent In Vivo Selection to Identify AAV Variants That Enable Efficient and Widespread Gene Transfer to the Adult Central Nervous System",
    journal = "Molecular Therapy",
    year = "2016",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20160527-092723542",
    id = "record",
    issn = "1525-0016",
    doi = "10.1016/S1525-0016(16)33061-1",
    volume = "24"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20160420-090626768,
    title = "Cholinergic Mesopontine Signals Govern Locomotion and Reward through Dissociable Midbrain Pathways",
    journal = "Neuron",
    year = "2016",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20160420-090626768",
    id = "record",
    issn = "0896-6273",
    doi = "10.1016/j.neuron.2016.03.028",
    volume = "90",
    pmcid = "PMC4840478"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20160606-133730058,
    title = "Tools for Anatomical and Functional Analysis of Widely Distributed Brain Networks",
    journal = "Biophysical Journal",
    year = "2016",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20160606-133730058",
    id = "record",
    issn = "0006-3495",
    doi = "10.1016/j.bpj.2015.11.1965",
    volume = "110"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20160603-153016574,
    title = "Rhodopsin Engineering through Structure-Guided Recombination",
    journal = "Biophysical Journal",
    year = "2016",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20160603-153016574",
    id = "record",
    issn = "0006-3495",
    doi = "10.1016/j.bpj.2015.11.947",
    volume = "110"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20160201-131537838,
    title = "Cre-dependent selection yields AAV variants for widespread gene transfer to the adult brain",
    journal = "Nature Biotechnology",
    year = "2016",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20160201-131537838",
    id = "record",
    issn = "1087-0156",
    doi = "10.1038/nbt.3440",
    volume = "34",
    pmcid = "PMC5088052"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20160202-092152118,
    title = "Fluorescent boost for voltage sensors",
    journal = "Nature",
    year = "2016",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20160202-092152118",
    id = "record",
    issn = "0028-0836",
    doi = "10.1038/529469a",
    volume = "529"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20160108-103050704,
    title = "Genomic Reconstruction of an Uncultured Hydrothermal Vent Gammaproteobacterial Methanotroph (Family Methylothermaceae) Indicates Multiple Adaptations to Oxygen Limitation",
    journal = "Frontiers in Microbiology",
    year = "2015",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20160108-103050704",
    id = "record",
    issn = "1664-302X",
    doi = "10.3389/fmicb.2015.01425",
    volume = "6",
    pmcid = "PMC4688376"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20150914-123933415,
    title = "Whole-body tissue stabilization and selective extractions via tissue-hydrogel hybrids for high-resolution intact circuit mapping and phenotyping",
    journal = "Nature Protocols",
    year = "2015",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20150914-123933415",
    id = "record",
    issn = "1754-2189",
    doi = "10.1038/nprot.2015.122",
    volume = "10",
    pmcid = "PMC4917295"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20150728-090618874,
    title = "Genetically Encoded Spy Peptide Fusion System to Detect Plasma Membrane-Localized Proteins In Vivo",
    journal = "Chemistry and Biology",
    year = "2015",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20150728-090618874",
    id = "record",
    issn = "1074-5521",
    doi = "10.1016/j.chembiol.2015.06.020",
    volume = "22",
    pmcid = "PMC4546540"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20140730-113211664,
    title = "Archaerhodopsin variants with enhanced voltage-sensitive fluorescence in mammalian and Caenorhabditis elegans neurons",
    journal = "Nature Communications",
    year = "2014",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20140730-113211664",
    id = "record",
    issn = "2041-1723",
    doi = "10.1038/ncomms5894",
    volume = "5",
    pmcid = "PMC4166526"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20140825-213535516,
    title = "Directed evolution of a far-red fluorescent rhodopsin",
    journal = "Proceedings of the National Academy of Sciences of the United States of America",
    year = "2014",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20140825-213535516",
    id = "record",
    issn = "0027-8424",
    doi = "10.1073/pnas.1413987111",
    volume = "111",
    pmcid = "PMC4246972"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20140801-121634734,
    title = "Single-Cell Phenotyping within Transparent Intact Tissue through Whole-Body Clearing",
    journal = "Cell",
    year = "2014",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20140801-121634734",
    id = "record",
    issn = "0092-8674",
    doi = "10.1016/j.cell.2014.07.017",
    volume = "158",
    pmcid = "PMC4153367"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20140714-121054059,
    title = "Bioelectronic medicines: a research roadmap",
    journal = "Nature Reviews Drug Discovery",
    year = "2014",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20140714-121054059",
    id = "record",
    issn = "1474-1776",
    doi = "10.1038/nrd4351",
    volume = "13"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20130513-151857819,
    title = "Structural and molecular interrogation of intact biological systems",
    journal = "Nature",
    year = "2013",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20130513-151857819",
    id = "record",
    issn = "0028-0836",
    doi = "10.1038/nature12107",
    volume = "497",
    pmcid = "PMC4092167"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20130513-151856843,
    title = "Optogenetic Delay of Status Epilepticus Onset in an In Vivo Rodent Epilepsy Model",
    journal = "PLoS ONE",
    year = "2013",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20130513-151856843",
    id = "record",
    issn = "1932-6203",
    doi = "10.1371/journal.pone.0062013",
    volume = "8",
    pmcid = "PMC3634849"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20121206-140040487,
    title = "Principles for applying optogenetic tools derived from direct comparative analysis of microbial opsins",
    journal = "Nature Methods",
    year = "2012",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20121206-140040487",
    id = "record",
    issn = "1548-7091",
    doi = "10.1038/NMETH.1808",
    volume = "9",
    pmcid = "PMC4165888"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20121206-152726999,
    title = "Leptin regulates the reward value of nutrient",
    journal = "Nature Neuroscience",
    year = "2011",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20121206-152726999",
    id = "record",
    issn = "1097-6256",
    doi = "10.1038/nn.2977",
    volume = "14",
    pmcid = "PMC4238286"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20121206-085452439,
    title = "Dynamics of Retrieval Strategies for Remote Memories",
    journal = "Cell",
    year = "2011",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20121206-085452439",
    id = "record",
    issn = "0092-8674",
    doi = "10.1016/j.cell.2011.09.033",
    volume = "147"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20121206-133910388,
    title = "Amygdala circuitry mediating reversible and bidirectional control of anxiety",
    journal = "Nature",
    year = "2011",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20121206-133910388",
    id = "record",
    issn = "0028-0836",
    doi = "10.1038/nature09820",
    volume = "471",
    pmcid = "PMC3154022"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20121211-085000915,
    title = "Cholinergic Interneurons Control Local Circuit Activity and Cocaine Conditioning",
    journal = "Science",
    year = "2010",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20121211-085000915",
    id = "record",
    issn = "0036-8075",
    doi = "10.1126/science.1193771",
    volume = "330",
    pmcid = "PMC3142356"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20121206-103459856,
    title = "Global and local fMRI signals driven by neurons defined optogenetically by type and wiring",
    journal = "Nature",
    year = "2010",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20121206-103459856",
    id = "record",
    issn = "0028-0836",
    doi = "10.1038/nature09108",
    volume = "465",
    pmcid = "PMC3177305"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20121206-083746393,
    title = "Molecular and Cellular Approaches for Diversifying and Extending Optogenetics",
    journal = "Cell",
    year = "2010",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20121206-083746393",
    id = "record",
    issn = "0092-8674",
    doi = "10.1016/j.cell.2010.02.037",
    volume = "141",
    pmcid = "PMC4160532"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20121206-154946294,
    title = "Optogenetic interrogation of neural circuits: technology for probing mammalian brain structures",
    journal = "Nature Protocols",
    year = "2010",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20121206-154946294",
    id = "record",
    issn = "1754-2189",
    doi = "10.1038/nprot.2009.226",
    volume = "5",
    pmcid = "PMC4503465"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20121211-083527990,
    title = "Optical Deconstruction of Parkinsonian Neural Circuitry",
    journal = "Science",
    year = "2009",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20121211-083527990",
    id = "record",
    issn = "0036-8075",
    doi = "10.1126/science.1167093",
    volume = "324",
    pmcid = "PMC6744370"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20121206-102214115,
    title = "eNpHR: a Natronomonas halorhodopsin enhanced for optogenetic applications",
    journal = "Brain Cell Biology",
    year = "2008",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20121206-102214115",
    id = "record",
    issn = "1559-7105",
    doi = "10.1007/s11068-008-9027-6",
    volume = "36",
    pmcid = "PMC2588488"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20121206-101209730,
    title = "Controlling Neuronal Activity",
    journal = "American Journal of Psychiatry",
    year = "2008",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20121206-101209730",
    id = "record",
    issn = "0002-953X",
    doi = "10.1176/appi.ajp.2008.08030444",
    volume = "165"
}


@article{https://resolver.caltech.edu/CaltechAUTHORS:20121206-095456619,
    title = "Targeting and Readout Strategies for Fast Optical Neural Control In Vitro and In Vivo",
    journal = "Journal of Neuroscience",
    year = "2007",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20121206-095456619",
    id = "record",
    issn = "0270-6474",
    doi = "10.1523/JNEUROSCI.3578-07.2007",
    volume = "27",
    pmcid = "PMC6673457"
}