Guttman, Mitchell

Article from CaltechAUTHORS

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• Guo, Jimmy K. and Guttman, Mitchell (2022) Regulatory non-coding RNAs: everything is possible, but what is important?; Nature Methods; Vol. 19; No. 10; 1156-1159; 10.1038/s41592-022-01629-6
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• Quinodoz, Sofia A. and Guttman, Mitchell (2022) Essential Roles for RNA in Shaping Nuclear Organization; Cold Spring Harbor Perspectives in Biology; Vol. 14; No. 5; a039719; PMCID PMC9159268; 10.1101/cshperspect.a039719
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• Guttman, Mitchell (2022) How non-coding RNAs shape nuclear structure to regulate gene expression; Biophysical Journal; Vol. 121; No. 3; 167a; 10.1016/j.bpj.2021.11.1898
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• Strehle, Mackenzie and Guttman, Mitchell (2020) Xist drives spatial compartmentalization of DNA and protein to orchestrate initiation and maintenance of X inactivation; Current Opinion in Cell Biology; Vol. 64; 139-147; 10.1016/j.ceb.2020.04.009
• McDonel, Patrick and Guttman, Mitchell (2019) Approaches for Understanding the Mechanisms of Long Noncoding RNA Regulation of Gene Expression; Cold Spring Harbor Perspectives in Biology; Vol. 11; No. 12; Art. No. a032151; PMCID PMC6886450; 10.1101/cshperspect.a032151
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• Guttman, Mitchell and Breuer, Manuel (2017) Cell scientist to watch – Mitchell Guttman; Journal of Cell Science; Vol. 130; No. 9; 1497-1499; 10.1242/jcs.203976
• Blanco, Mario R. and Guttman, Mitchell (2017) Re-evaluating the foundations of lncRNA–Polycomb function; EMBO Journal; Vol. 36; No. 8; 964-966; 10.15252/embj.201796796
• Szempruch, Anthony and Guttman, Mitchell (2017) Linking Protein and RNA Function within the Same Gene; Cell; Vol. 168; No. 5; 753-755; 10.1016/j.cell.2017.02.014
• Guttman, Mitchell (2017) How a lncRNA Shapes Chromatin Structure to Control Gene Expression; Biophysical Journal; Vol. 112; No. 3, Supp. 1; 158a; 10.1016/j.bpj.2016.11.868
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• McHugh, C. A. and Guttman, M. (2016) Uncovering mechanisms of lncRNA function through comprehensive identification of direct lncRNA-interacting proteins; Molecular Biology of the Cell; Vol. 27; No. 25; M121; 10.1091/mbc.E16-10-0736
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• Dekker, Job and Guttman, Mitchell, et el. (2016) A Guide to Packing Your DNA; Cell; Vol. 165; No. 2; 259-261; 10.1016/j.cell.2016.03.039
• Chen, Jenny and Shishkin, Alexander A., et el. (2016) Evolutionary analysis across mammals reveals distinct classes of long non-coding RNAs; Genome Biology; Vol. 17; Art. No. 19; PMCID PMC4739325; 10.1186/s13059-016-0880-9
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• Quinodoz, Sofia and Guttman, Mitchell (2014) Long noncoding RNAs: an emerging link between gene regulation and nuclear organization; Trends in Cell Biology; Vol. 24; No. 11; 651-663; PMCID PMC4254690; 10.1016/j.tcb.2014.08.009
• Ach, Robert A. and Tsang, Peter, et el. (2014) Use of complex oligonucleotide libraries for concurrent high-resolution fluorescence imaging of both DNA and RNA in various sample types; Cancer Research; Vol. 74; No. 19 Suppleme; Art. No. 1513; 10.1158/1538-7445.AM2014-1513
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• Rinn, John and Guttman, Mitchell (2014) RNA and dynamic nuclear organization; Science; Vol. 345; No. 6202; 1240-1241; PMCID PMC4186717; 10.1126/science.1252966
• Hacisuleyman, Ezgi and Goff, Loyal A., et el. (2014) Topological organization of multichromosomal regions by the long intergenic noncoding RNA Firre; Nature Structural & Molecular Biology; Vol. 21; No. 2; 198-206; PMCID PMC3950333; 10.1038/nsmb.2764
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• Kirby, Andrew and Guttman, Mitchell (2013) Mutations causing medullary cystic kidney disease type 1 lie in a large VNTR in MUC1 missed by massively parallel sequencing; Nature Genetics; Vol. 45; No. 3; 299-303; PMCID PMC3901305; 10.1038/ng.2543
• Garber, Manuel and Guttman, Mitchell (2012) A High-Throughput Chromatin Immunoprecipitation Approach Reveals Principles of Dynamic Gene Regulation in Mammals; Molecular Cell; Vol. 47; No. 5; 810-822; PMCID PMC3873101; 10.1016/j.molcel.2012.07.030
• Guttman, Mitchell and Rinn, John L. (2012) Modular regulatory principles of large non-coding RNAs; Nature; Vol. 482; No. 7385; 339-346; PMCID PMC4197003; 10.1038/nature10887
• Lindblad-Toh, Kerstin and Guttman, Mitchell (2011) A high-resolution map of human evolutionary constraint using 29 mammals; Nature; Vol. 478; No. 7370; 476-482; PMCID PMC3207357; 10.1038/nature10530
• Guttman, Mitchell and Donaghey, Julie, et el. (2011) lincRNAs act in the circuitry controlling pluripotency and differentiation; Nature; Vol. 477; No. 7364; 295-300; PMCID PMC3175327; 10.1038/nature10398
• Garber, Manuel and Grabherr, Manfred G., et el. (2011) Computational methods for transcriptome annotation and quantification using RNA-seq; Nature Methods; Vol. 8; No. 6; 469-477; 10.1038/NMETH.1613
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• Huarte, Maite and Guttman, Mitchell, et el. (2010) A Large Intergenic Noncoding RNA Induced by p53 Mediates Global Gene Repression in the p53 Response; Cell; Vol. 142; No. 3; 409-419; PMCID PMC2956184; 10.1016/j.cell.2010.06.040
• Guttman, Mitchell and Garber, Manuel, et el. (2010) Ab initio reconstruction of cell type–specific transcriptomes in mouse reveals the conserved multi-exonic structure of lincRNAs; Nature Biotechnology; Vol. 28; No. 5; 503-510; PMCID PMC2868100; 10.1038/nbt.1633
• Ozsolak, Fatih and Goren, Alon, et el. (2010) Digital transcriptome profiling from attomole-level RNA samples; Genome Research; Vol. 20; No. 4; 519-525; PMCID PMC2847755; 10.1101/gr.102129.109
• Amit, Ido and Garber, Manuel, et el. (2009) Unbiased Reconstruction of a Mammalian Transcriptional Network Mediating Pathogen Responses; Science; Vol. 326; No. 5950; 257-263; PMCID PMC2879337; 10.1126/science.1179050
• Khalil, Ahmad M. and Guttman, Mitchell, et el. (2009) Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression; Proceedings of the National Academy of Sciences of the United States of America; Vol. 106; No. 28; 11667-11672; PMCID PMC2704857; 10.1073/pnas.0904715106
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• Guttman, Mitchell and Amit, Ido, et el. (2009) Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals; Nature; Vol. 458; No. 7235; 223-227; PMCID PMC2754849; 10.1038/nature07672
• Guttman, Mitchell and Mies, Carolyn, et el. (2007) Assessing the Significance of Conserved Genomic Aberrations Using High Resolution Genomic Microarrays; PLoS Genetics; Vol. 3; No. 8; Art. No. e143; PMCID PMC1950957; 10.1371/journal.pgen.0030143
• Nagi, Chandandeep and Guttman, Mitchell, et el. (2005) N-cadherin Expression in Breast Cancer: Correlation with an Aggressive Histologic Variant – Invasive Micropapillary Carcinoma; Breast Cancer Research and Treatment; Vol. 94; No. 3; 225-235; 10.1007/s10549-005-7727-5
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