McMahon, Andrew

Combined from CaltechAUTHORS

• Polonsky, Michal and Gerhardt, Louisa M. S., et el. (2024) Spatial transcriptomics defines injury specific microenvironments and cellular interactions in kidney regeneration and disease; Nature Communications; Vol. 15; No. 1; 7010; PMCID PMC11377535; 10.1038/s41467-024-51186-z
• Der, Balint and Bugacov, Helena, et el. (2024) Cadherin Adhesion Complexes Direct Cell Aggregation in the Epithelial Transition of Wnt-Induced Nephron Progenitor Cells; Development; Vol. 151; No. 18; dev202303; 10.1242/dev.202303
• Bugacov, Helena and Der, Balint, et el. (2024) Dose-dependent responses to canonical Wnt transcriptional complexes in the regulation of mammalian nephron progenitors; Development; Vol. 151; No. 18; dev202279; 10.1242/dev.202279
• Niu, Xubo and Melendez, Delmy L., et el. (2024) A conserved transcription factor regulatory program promotes tendon fate; Developmental Cell; Vol. 59; 1-18; 10.1016/j.devcel.2024.08.006
• Kim, Sunghyun and Koppitch, Kari, et el. (2024) Comparative single-cell analyses identify shared and divergent features of human and mouse kidney development; Developmental Cell; 10.1016/j.devcel.2024.07.013
• Huang, Biao and Zeng, Zipeng, et el. (2024) Long-term expandable mouse and human-induced nephron progenitor cells enable kidney organoid maturation and modeling of plasticity and disease; Cell Stem Cell; Vol. 31; No. 6; 921-939.e17; 10.1016/j.stem.2024.04.002
• Polonsky, Michal and Gerhardt, Louisa M. S., et el. (2023) Spatial transcriptomics defines injury-specific microenvironments in the adult mouse kidney and novel cellular interactions in regeneration and disease; bioRxiv; 10.1101/2023.11.22.568217
• Xiong, Lingyun and Liu, Jing, et el. (2023) Direct androgen receptor control of sexually dimorphic gene expression in the mammalian kidney; Developmental Cell; Vol. 58; No. 21; 2338-2358.e5; PMCID PMC10873092; 10.1016/j.devcel.2023.08.010
• Khalil, Natalie N. and Petersen, Andrew P., et el. (2023) User-friendly microfluidic system reveals native-like morphological and transcriptomic phenotypes induced by shear stress in proximal tubule epithelium; APL Bioengineering; Vol. 7; No. 3; 036106; 10.1063/5.0143614
• Cippà, Pietro E. and McMahon, Andrew P. (2023) Proximal tubule responses to injury: interrogation by single-cell transcriptomics; Current Opinion in Nephrology & Hypertension; Vol. 32; No. 4; 352-358; 10.1097/mnh.0000000000000893
• Huang, Biao and Zeng, Zipeng, et el. (2023) Modeling kidney development, disease, and plasticity with clonal expandable nephron progenitor cells and nephron organoids; 10.1101/2023.05.25.542343
• Xiong, Lingyun and Liu, Jing, et el. (2023) Direct androgen receptor regulation of sexually dimorphic gene expression in the mammalian kidney; PMCID PMC10187285; 10.1101/2023.05.06.539585
• Gerhardt, Louisa M.S. and Koppitch, Kari, et el. (2023) Lineage Tracing and Single-Nucleus Multiomics Reveal Novel Features of Adaptive and Maladaptive Repair after Acute Kidney Injury; Journal of the American Society of Nephrology; Vol. 34; No. 4; 554-571; 10.1681/asn.0000000000000057
• Hojo, Hironori and Saito, Taku, et el. (2022) Runx2 regulates chromatin accessibility to direct the osteoblast program at neonatal stages; Cell Reports; Vol. 40; No. 10; 111315; 10.1016/j.celrep.2022.111315
• Yang, Rui and Meyer, Amanda S., et el. (2022) A genetic model for in vivo proximity labelling of the mammalian secretome; Open Biology; Vol. 12; No. 8; 220149; 10.1098/rsob.220149
• Tran, Tracy and Song, Cheng Jack, et el. (2022) A scalable organoid model of human autosomal dominant polycystic kidney disease for disease mechanism and drug discovery; Cell Stem Cell; Vol. 29; No. 7; 1083-1101.e7; 10.1016/j.stem.2022.06.005
• Gerhardt, Louisa M.S. and McMahon, Andrew P. (2022) Identifying Common Molecular Mechanisms in Experimental and Human Acute Kidney Injury; Seminars in Nephrology; Vol. 42; No. 3; 151286; 10.1016/j.semnephrol.2022.10.012
• Naved, Bilal A. and Bonventre, Joseph V., et el. (2022) Kidney repair and regeneration: perspectives of the NIDDK (Re)Building a Kidney consortium; Kidney International; Vol. 101; No. 5; 845-853; 10.1016/j.kint.2022.02.023
• McMahon, Andrew P. and Ichida, Justin K. (2022) Repairing the blood-brain barrier; Science; Vol. 375; No. 6582; 715-716; 10.1126/science.abn7921
• Gerhardt, Louisa M.S. and McMahon, Andrew P. (2021) Multi-omic approaches to acute kidney injury and repair; Current Opinion in Biomedical Engineering; Vol. 20; 100344; 10.1016/j.cobme.2021.100344
• Miao, Zhen and Humphreys, Benjamin D., et el. (2021) Multi-omics integration in the age of million single-cell data; Nature Reviews Nephrology; Vol. 17; No. 11; 710-724; 10.1038/s41581-021-00463-x
• Gerhardt, Louisa M. S. and Liu, Jing, et el. (2021) Single-nuclear transcriptomics reveals diversity of proximal tubule cell states in a dynamic response to acute kidney injury; Proceedings of the National Academy of Sciences; Vol. 118; No. 27; e2026684118; 10.1073/pnas.2026684118
• Zeng, Zipeng and Huang, Biao, et el. (2021) Generation of patterned kidney organoids that recapitulate the adult kidney collecting duct system from expandable ureteric bud progenitors; Nature Communications; Vol. 12; 3641; 10.1038/s41467-021-23911-5
• Droujinine, Ilia A. and Meyer, Amanda S., et el. (2021) Proteomics of protein trafficking by in vivo tissue-specific labeling; Nature Communications; Vol. 12; 2382; 10.1038/s41467-021-22599-x
• Guo, Qiuyu and Kim, Albert, et el. (2021) A β-catenin-driven switch in TCF/LEF transcription factor binding to DNA target sites promotes commitment of mammalian nephron progenitor cells; eLife; Vol. 10; e64444; 10.7554/elife.64444
• Cornelius, Ryan J. and Sharma, Avika, et el. (2020) A novel distal convoluted tubule-specific Cre-recombinase driven by the NaCl cotransporter gene; American Journal of Physiology-Renal Physiology; Vol. 319; No. 3; F423-F435; PMCID PMC7509282; 10.1152/ajprenal.00101.2020
• Legouis, David and Ricksten, Sven-Erick, et el. (2020) Altered proximal tubular cell glucose metabolism during acute kidney injury is associated with mortality; Nature Metabolism; Vol. 2; No. 8; 732-743; 10.1038/s42255-020-0238-1
• Rutledge, Elisabeth A. and McMahon, Andrew P. (2020) Mutational analysis of genes with ureteric progenitor cell‐specific expression in branching morphogenesis of the mouse kidney; Developmental Dynamics; Vol. 249; No. 6; 765-774; 10.1002/dvdy.157
• Liu, Jing and Kumar, Sanjeev, et el. (2020) Renoprotective and Immunomodulatory Effects of GDF15 following AKI Invoked by Ischemia-Reperfusion Injury; Journal of the American Society of Nephrology; Vol. 31; No. 4; 701-715; 10.1681/asn.2019090876
• Rutledge, Elisabeth A. and Lindström, Nils O., et el. (2020) Genetic manipulation of ureteric bud tip progenitors in the mammalian kidney through an Adamts18 enhancer driven tet-on inducible system; Developmental Biology; Vol. 458; No. 2; 164-176; 10.1016/j.ydbio.2019.11.007
• Ransick, Andrew and Lindström, Nils O., et el. (2019) Single-Cell Profiling Reveals Sex, Lineage, and Regional Diversity in the Mouse Kidney; Developmental Cell; Vol. 51; No. 3; 399-413.e7; 10.1016/j.devcel.2019.10.005
• Przepiorski, Aneta and Sander, Veronika, et el. (2018) A Simple Bioreactor-Based Method to Generate Kidney Organoids from Pluripotent Stem Cells; Stem Cell Reports; Vol. 11; No. 2; 470-484; 10.1016/j.stemcr.2018.06.018
• Vokes, Steven A. and Ji, Hongkai, et el. (2007) Genomic characterization of Gli-activator targets in sonic hedgehog-mediated neural patterning; Development; Vol. 134; No. 10; 1977 -1989; 10.1242/dev.001966
• Zirlinger, Mariela and Lo, Liching, et el. (2002) Transient expression of the bHLH factor neurogenin-2 marks a subpopulation of neural crest cells biased for a sensory but not a neuronal fate; Proceedings of the National Academy of Sciences of the United States of America; Vol. 99; No. 12; 8084-8089; PMCID PMC123024; 10.1073/pnas.122231199
• Dickinson, Mary E. and Selleck, Mark A. J., et el. (1995) Dorsalization of the neural tube by the non-neural ectoderm; Development; Vol. 121; No. 7; 2099-2106
• Flytzanis, Constantin N. and McMahon, Andrew P., et el. (1985) Persistence and Integration of Cloned DNA in Postembryonic Sea Urchins; Developmental Biology; Vol. 108; No. 2; 431-442; 10.1016/0012-1606(85)90046-6
• McMahon, Andrew P. and Flytzanis, Constantin N., et el. (1985) Introduction of Cloned DNA into Sea Urchin Egg Cytoplasm: Replication and Persistence during Embryogenesis; Developmental Biology; Vol. 108; No. 2; 420-430; 10.1016/0012-1606(85)90045-4
• McMahon, A. P. and Novak, T. J., et el. (1984) Inducible expression of a cloned heat shock fusion gene in sea urchin embryos; Proceedings of the National Academy of Sciences of the United States of America; Vol. 81; No. 23; 7490-7494; PMCID PMC392172
• McMahon, A. and Fosten, M., et el. (1983) X-chromosome inactivation mosaicism in the three germ layers and the germ line of the mouse embryo; Journal of Embryology and Experimental Morphology; Vol. 74; 207-220