Orphan, Victoria

Article from CaltechAUTHORS

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• Tocheva, Elitza I. and Dekas, Anne E., et el. (2013) Polyphosphate Storage during Sporulation in the Gram-Negative Bacterium Acetonema longum; Journal of Bacteriology; Vol. 195; No. 17; 3940-3946; PMCID PMC3754598; 10.1128/JB.00712-13
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• Thurber, Andrew R. and Levin, Lisa A., et el. (2012) Archaea in metazoan diets: implications for food webs and biogeochemical cycling; ISME Journal; Vol. 6; No. 8; 1602-1612; PMCID PMC3400411; 10.1038/ismej.2012.16
• Levin, Lisa A. and Orphan, Victoria J., et el. (2012) A hydrothermal seep on the Costa Rica margin: middle ground in a continuum of reducing ecosystems; Proceedings of the Royal Society of London. Series B, Biological Sciences; Vol. 279; No. 1738; 2580-2588; PMCID PMC3350710; 10.1098/rspb.2012.0205
• Harrison, Benjamin K. and Orphan, Victoria J. (2012) Method for Assessing Mineral Composition-Dependent Patterns in Microbial Diversity Using Magnetic and Density Separation; Geomicrobiology Journal; Vol. 29; No. 5; 435-449; 10.1080/01490451.2011.581327
• Glass, Jennifer B. and Orphan, Victoria J. (2012) Trace metal requirements for microbial enzymes involved in the production and consumption of methane and nitrous oxide; Frontiers in Microbiology; Vol. 3; Art. No. 61; PMCID PMC3282944; 10.3389/fmicb.2012.00061
• Bailey, Jake V. and Salman, Verena, et el. (2011) Dimorphism in methane seep-dwelling ecotypes of the largest known bacteria; ISME Journal; Vol. 5; No. 12; 1926-1935; PMCID PMC3223306; 10.1038/ismej.2011.66
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• Orphan, Victoria J. and Hoehler, Tori M. (2011) Microbiology: Hydrogen for dinner; Nature; Vol. 476; No. 7359; 154-155; 10.1038/476154a
• Shapiro, Orr H. and Hatzenpichler, Roland, et el. (2011) Multicellular photo-magnetotactic bacteria; Environmental Microbiology Reports; Vol. 3; No. 2; 233-238; 10.1111/j.1758-2229.2010.00215.x
• Orphan, Victoria (2011) Fish-Sims: Characterizing the Metabolic Potential and Interspecies Interactions between Uncultured Environmental Microorganisms; Biophysical Journal; Vol. 100; No. 3, S1; 37a; 10.1016/j.bpj.2010.12.406
• Orphan, Victoria J. (2011) Getting cozy: hidden microbial interactions in nature; Environmental Microbiology Reports; Vol. 3; No. 1; 16-18; 10.1111/j.1758-2229.2010.00236.x
• Tavormina, Patricia L. and Orphan, Victoria J., et el. (2011) A novel family of functional operons encoding methane/ammonia monooxygenase-related proteins in gammaproteobacterial methanotrophs; Environmental Microbiology Reports; Vol. 3; No. 1; 91-100; 10.1111/j.1758-2229.2010.00192.x
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• Goffredi, Shana K. and Orphan, Victoria J. (2010) Bacterial community shifts in taxa and diversity in response to localized organic loading in the deep sea; Environmental Microbiology; Vol. 12; No. 2; 344-363; 10.1111/j.1462-2920.2009.02072.x
• Bailey, Jake V. and Raub, Timothy D., et el. (2010) Pseudofossils in relict methane seep carbonates resemble endemic microbial consortia; Palaeogeography, Palaeoclimatology, Palaeoecology; Vol. 285; No. 1-2; 131-142; 10.1016/j.palaeo.2009.11.002
• Bailey, Jake V. and Orphan, Victoria J., et el. (2009) Chemotrophic Microbial Mats and Their Potential for Preservation in the Rock Record; Astrobiology; Vol. 9; No. 9; 843-859; 10.1089/ast.2008.0314
• Dekas, Anne E. and Poretsky, Rachel S., et el. (2009) Deep-Sea Archaea Fix and Share Nitrogen in Methane-Consuming Microbial Consortia; Science; Vol. 326; No. 5951; 422-426; 10.1126/science.1178223
• Fike, David A. and Finke, Niko, et el. (2009) The effect of sulfate concentration on (sub)millimeter-scale sulfide δ^(34)S in hypersaline cyanobacterial mats over the diurnal cycle; Geochimica et Cosmochimica Acta; Vol. 73; No. 20; 6187-6204; 10.1016/j.gca.2009.07.006
• House, Christopher H. and Orphan, Victoria J., et el. (2009) Extensive carbon isotopic heterogeneity among methane seep microbiota; Environmental Microbiology; Vol. 11; No. 9; 2207-2215; 10.1111/j.1462-2920.2009.01934.x
• Beal, Emily J. and House, Christopher H., et el. (2009) Manganese- and iron-dependent marine methane oxidation; Science; Vol. 325; No. 5937; 184-187; 10.1126/science.1169984
• Orphan, Victoria J. and Turk, Kendra A., et el. (2009) Patterns of ^(15)N assimilation and growth of methanotrophic ANME-2 archaea and sulfate-reducing bacteria within structured syntrophic consortia revealed by FISH-SIMS; Environmental Microbiology; Vol. 11; No. 7; 1777-1791; 10.1111/j.1462-2920.2009.01903.x
• Orphan, V. J. and House, C. H. (2009) Geobiological investigations using secondary ion mass spectrometry: microanalysis of extant and paleo-microbial processes; Geobiology; Vol. 7; No. 3; 360-372; 10.1111/j.1472-4669.2009.00201.x
• Fike, David A. and Orphan, Victoria J. (2009) High resolution SIMS-based sulfide δ^(34)S: A new tool for characterizing microbial activity in a variety of depositional environments; Geochimica et Cosmochimica Acta; Vol. 73; No. 13, S; A375; 10.1016/j.gca.2009.05.005
• Orphan, Victoria J. (2009) Methods for unveiling cryptic microbial partnerships in nature; Current Opinion in Microbiology; Vol. 12; No. 3; 231-237; 10.1016/j.mib.2009.04.003
• Harrison, Benjamin K. and Zhang, Husen, et el. (2009) Variations in archaeal and bacterial diversity associated with the sulfate-methane transition zone in continental margin sediments (Santa Barbara Basin, California); Applied and Environmental Microbiology; Vol. 75; No. 6; 1487-1499; PMCID PMC2655439; 10.1128/AEM.01812-08
• Jahnke, L. L. and Orphan, V. J., et el. (2008) Lipid biomarker and phylogenetic analyses to reveal archaeal biodiversity and distribution in hypersaline microbial mat and underlying sediment; Geobiology; Vol. 6; No. 4; 394-410; 10.1111/j.1472-4669.2008.00165.x
• Orphan, V. J. and Jahnke, L. L., et el. (2008) Characterization and spatial distribution of methanogens and methanogenic biosignatures in hypersaline microbial mats of Baja California; Geobiology; Vol. 6; No. 4; 376-393; 10.1111/j.1472-4669.2008.00166.x
• Fike, David Andrew and Gammon, Crystal Lynn, et el. (2008) Micron-scale mapping of sulfur cycling across the oxycline of a cyanobacterial mat: a paired nanoSIMS and CARD-FISH approach; ISME Journal; Vol. 2; No. 7; 749-759; 10.1038/ismej.2008.39
• Fike, David A. and Gammon, Crystal L., et el. (2008) Micron-scale mapping of sulfur cycling across the oxycline of a cyanobacterial mat; Geochimica et Cosmochimica Acta; Vol. 72; No. 12; A268; 10.1016/j.gca.2008.05.009
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• Pernthaler, Annelie and Dekas, Anne E., et el. (2008) Diverse syntrophic partnerships from deep-sea methane vents revealed by direct cell capture and metagenomics; Proceedings of the National Academy of Sciences of the United States of America; Vol. 105; No. 19; 7052-7057; PMCID PMC2383945; 10.1073/pnas.0711303105
• Goffredi, Shana K. and Wilpiszeski, Regina, et el. (2008) Temporal evolution of methane cycling and phylogenetic diversity of archaea in sediments from a deep-sea whale-fall in Monterey Canyon, California; ISME Journal; Vol. 2; No. 2; 204-220; 10.1038/ismej.2007.103
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• Orphan, Victoria J. and House, Christopher H., et el. (2008) Archaea, Methane, and Oases of the Deep; Nova Acta Leopoldina; Vol. 96; No. 356; 19-23
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• Treude, Tina and Orphan, Victoria J., et el. (2007) Consumption of Methane and CO_2 by Methanotrophic Microbial Mats from Gas Seeps of the Anoxic Black Sea; Applied and Environmental Microbiology; Vol. 73; No. 7; 2271-2283; PMCID PMC1855681; 10.1128/AEM.02685-06
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• Goffredi, Shana K. and Orphan, Victoria J., et el. (2005) Evolutionary innovation: a bone-eating marine symbiosis; Environmental Microbiology; Vol. 7; No. 9; 1369-1378; 10.1111/j.1462-2920.2005.00824.x
• Orphan, V. J. and Ussler, W., III, et el. (2004) Geological, geochemical, and microbiological heterogeneity of the seafloor around methane vents in the Eel River Basin, offshore California; Chemical Geology; Vol. 205; No. 3-4; 265-289; 10.1016/j.chemgeo.2003.12.035
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• Girguis, Peter R. and Orphan, Victoria J., et el. (2003) Growth and Methane Oxidation Rates of Anaerobic Methanotrophic Archaea in a Continuous-Flow Bioreactor; Applied and Environmental Microbiology; Vol. 69; No. 9; 5472-5482; PMCID PMC194967; 10.1128/AEM.69.9.5472-5482.2003
• Orphan, V. J. and Goffredi, S. K., et el. (2003) Geochemical Influence on Diversity and Microbial Processes in High Temperature Oil Reservoirs; Geomicrobiology Journal; Vol. 20; No. 4; 295-311; 10.1080/01490450303898
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• Orphan, Victoria J. and House, Christopher H., et el. (2002) Multiple archaeal groups mediate methane oxidation in anoxic cold seep sediments; Proceedings of the National Academy of Sciences of the United States of America; Vol. 99; No. 11; 7663-7668; PMCID PMC124316; 10.1073/pnas.072210299
• Orphan, Victoria J. and House, Christopher H., et el. (2001) Methane-Consuming Archaea Revealed by Directly Coupled Isotopic and Phylogenetic Analysis; Science; Vol. 293; No. 5529; 484-487; 10.1126/science.1061338
• Orphan, V. J. and Hinrichs, K.-U., et el. (2001) Comparative Analysis of Methane-Oxidizing Archaea and Sulfate-Reducing Bacteria in Anoxic Marine Sediments; Applied and Environmental Microbiology; Vol. 67; No. 4; 1922-1934; PMCID PMC92814; 10.1128/AEM.67.4.1922-1934.2001
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• Orphan, V. J. and Taylor, L. T., et el. (2000) Culture-Dependent and Culture-Independent Characterization of Microbial Assemblages Associated with High-Temperature Petroleum Reservoirs; Applied and Environmental Microbiology; Vol. 66; No. 2; 700-711; PMCID PMC91884; 10.1128/AEM.66.2.700-711.2000