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    title = "Distinct structural mechanisms determine substrate affinity and kinase activity of protein kinase Cα",
    journal = "Journal of Biological Chemistry",
    year = "2017",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20171009-115239146",
    id = "record",
    issn = "0021-9258",
    doi = "10.1074/jbc.M117.804781",
    volume = "292",
    pmcid = "PMC5625059"
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    title = "Virtual Screening for Binding of Phenylalanine Analogues to Phenylalanyl-tRNA Synthetase",
    journal = "Journal of the American Chemical Society",
    year = "2015",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20150116-152910657",
    id = "record",
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    doi = "10.1021/ja0175441",
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    title = "Role of Specific Cations and Water Entropy on the Stability of Branched DNA Motif Structures",
    journal = "Journal of Physical Chemistry B",
    year = "2012",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20121113-113520226",
    id = "record",
    issn = "1520-6106",
    doi = "10.1021/jp306473u",
    volume = "116"
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    title = "Prediction of the 3-D structure of rat MrgA G protein-coupled receptor and identification of its binding site",
    journal = "Journal of Molecular Graphics and Modelling",
    year = "2007",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20190226-155229153",
    id = "record",
    issn = "1093-3263",
    doi = "10.1016/j.jmgm.2007.07.003",
    volume = "26",
    pmcid = "PMC2151207"
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    title = "Prediction of the 3D Structure and Dynamics of Human DP G-Protein Coupled Receptor Bound to an Agonist and an Antagonist",
    journal = "Journal of the American Chemical Society",
    year = "2007",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20170515-111024186",
    id = "record",
    issn = "0002-7863",
    doi = "10.1021/ja070865d",
    volume = "129",
    pmcid = "PMC2535578"
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    title = "Understanding DNA based Nanostructures",
    journal = "Journal of Nanoscience and Nanotechnology",
    year = "2007",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:MAIjnn07",
    id = "record",
    issn = "1533-4880",
    doi = "10.1166/jnn.2007.704",
    volume = "7"
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    title = "Functional selectivity of dopamine D\_1 receptor agonists in regulating the fate of internalized receptors",
    journal = "Neuropharmacology",
    year = "2007",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20190227-080144342",
    id = "record",
    issn = "0028-3908",
    doi = "10.1016/j.neuropharm.2006.08.028",
    volume = "52",
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    title = "Predictions of CCR1 Chemokine Receptor Structure and BX 471 Antagonist Binding Followed by Experimental Validation",
    journal = "Journal of Biological Chemistry",
    year = "2006",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:VAIjbc06",
    id = "record",
    issn = "0021-9258",
    doi = "10.1074/jbc.M601389200",
    volume = "281"
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    title = "Sulfation patterns of glycosaminoglycans encode molecular recognition and activity",
    journal = "Nature Chemical Biology",
    year = "2006",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20150408-095647687",
    id = "record",
    issn = "1552-4450",
    doi = "10.1038/nchembio810",
    volume = "2"
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    title = "Exploring the Molecular Mechanism for Color Distinction in Humans",
    journal = "Journal of Physical Chemistry B",
    year = "2006",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20170609-074403703",
    id = "record",
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    doi = "10.1021/jp057144q",
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    title = "Fidelity of seryl-tRNA synthetase to binding of natural amino acids from HierDock first principles computations",
    journal = "Protein Engineering, Design and Selection",
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    url = "https://resolver.caltech.edu/CaltechAUTHORS:20110711-100506607",
    id = "record",
    issn = "1741-0126",
    doi = "10.1093/protein/gzl001",
    volume = "19"
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    title = "Dynamic behavior of fully solvated beta2-adrenergic receptor, embedded in the membrane with bound agonist or antagonist",
    journal = "Proceedings of the National Academy of Sciences of the United States of America",
    year = "2006",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:SPIpnas06",
    id = "record",
    issn = "0027-8424",
    doi = "10.1073/pnas.0511329103",
    volume = "103",
    pmcid = "PMC1458764"
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    title = "Atomic-Level Simulations of Seeman DNA Nanostructures: The Paranemic Crossover in Salt Solution",
    journal = "Biophysical Journal",
    year = "2006",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20190226-161805256",
    id = "record",
    issn = "0006-3495",
    doi = "10.1529/biophysj.105.064733",
    volume = "90",
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    title = "Test of the Binding Threshold Hypothesis for olfactory receptors: Explanation of the differential binding of ketones to the mouse and human orthologs of olfactory receptor 912-93",
    journal = "Protein Science",
    year = "2005",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20190301-092706597",
    id = "record",
    issn = "0961-8368",
    doi = "10.1110/ps.041119705",
    volume = "14",
    pmcid = "PMC2279295"
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    title = "The stability of Seeman JX DNA topoisomers of paranemic crossover (PX) molecules as a function of crossover number",
    journal = "Nucleic Acids Research",
    year = "2004",
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    id = "record",
    issn = "0305-1048",
    doi = "10.1093/nar/gkh931",
    volume = "32",
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    title = "Selectivity and specificity of substrate binding in methionyl-tRNA synthetase",
    journal = "Protein Science",
    year = "2004",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20170409-074101946",
    id = "record",
    issn = "0961-8368",
    doi = "10.1110/ps.04792204",
    volume = "13",
    pmcid = "PMC2286561"
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    title = "Predicted 3-D Structures for Mouse I7 and Rat I7 Olfactory Receptors and Comparison of Predicted Odor Recognition Profiles with Experiment",
    journal = "Chemical Senses",
    year = "2004",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20111013-095420851",
    id = "record",
    issn = "0379-864X",
    doi = "10.1093/chemse/bjh063",
    volume = "29"
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    title = "5-Formyluracil-Induced Perturbations of DNA Function",
    journal = "Biochemistry",
    year = "2004",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20170125-114501336",
    id = "record",
    issn = "0006-2960",
    doi = "10.1021/bi030247j",
    volume = "43"
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    title = "Making Sense of Olfaction through Predictions of the 3-D Structure and Function of Olfactory Receptors",
    journal = "Chemical Senses",
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    url = "https://resolver.caltech.edu/CaltechAUTHORS:20111013-073734976",
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    issn = "0379-864X",
    doi = "10.1093/chemse/bjh030",
    volume = "29"
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    title = "First Principles Predictions of the Structure and Function of G-Protein-Coupled Receptors: Validation for Bovine Rhodopsin",
    journal = "Biophysical Journal",
    year = "2004",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20190301-092706690",
    id = "record",
    issn = "0006-3495",
    doi = "10.1016/s0006-3495(04)74256-3",
    volume = "86",
    pmcid = "PMC1304048"
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    title = "The predicted 3D structure of the human D2 dopamine receptor and the binding site and binding affinities for agonists and antagonists",
    journal = "Proceedings of the National Academy of Sciences of the United States of America",
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    id = "record",
    issn = "0027-8424",
    doi = "10.1073/pnas.0400100101",
    volume = "101",
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    title = "Predicted 3D structure for the human β2 adrenergic receptor and its binding site for agonists and antagonists",
    journal = "Proceedings of the National Academy of Sciences of the United States of America",
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    url = "https://resolver.caltech.edu/CaltechAUTHORS:20141120-150243775",
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    volume = "101",
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    title = "HierVLS Hierarchical Docking Protocol for Virtual Ligand Screening of Large-Molecule Databases",
    journal = "Journal of Medicinal Chemistry",
    year = "2004",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20170419-103945779",
    id = "record",
    issn = "0022-2623",
    doi = "10.1021/jm030271v",
    volume = "47"
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@article{https://resolver.caltech.edu/CaltechAUTHORS:20170524-071408453,
    title = "Fidelity of Phenylalanyl-tRNA Synthetase in Binding the Natural Amino Acids",
    journal = "Journal of Physical Chemistry B",
    year = "2003",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20170524-071408453",
    id = "record",
    issn = "1520-6106",
    doi = "10.1021/jp034607o",
    volume = "107"
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    title = "Protein Dynamics in a Family of Laboratory Evolved Thermophilic Enzymes",
    journal = "Journal of Molecular Biology",
    year = "2003",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20180823-075442841",
    id = "record",
    issn = "0022-2836",
    doi = "10.1016/S0022-2836(03)00147-5",
    volume = "327"
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    title = "Prediction of structure and function of G protein-coupled
 receptors",
    journal = "Proceedings of the National Academy of Sciences of the United States of America",
    year = "2002",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20141120-095059378",
    id = "record",
    issn = "0027-8424",
    doi = "10.1073/pnas.122357199",
    volume = "99",
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    title = "Structure-based design of mutant Methanococcus jannaschii tyrosyl-tRNA synthetase for incorporation of O-methyl-L-tyrosine",
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    year = "2002",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20141124-133350326",
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    title = "Mechanism for antibody catalysis of the oxidation of water by singlet dioxygen",
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    year = "2002",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20141120-095436298",
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    title = "Stabilization of Coiled-Coil Peptide Domains by Introduction of Trifluoroleucine",
    journal = "Biochemistry",
    year = "2001",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20150122-091952579",
    id = "record",
    issn = "0006-2960",
    doi = "10.1021/bi0022588",
    volume = "40"
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    title = "Molecular mechanisms underlying differential odor responses of a mouse olfactory receptor",
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    url = "https://resolver.caltech.edu/CaltechAUTHORS:20141121-143114886",
    id = "record",
    issn = "0027-8424",
    doi = "10.1073/pnas.97.20.10712",
    volume = "97",
    pmcid = "PMC27088"
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    title = "Domain Motions in Phosphoglycerate Kinase using Hierarchical NEIMO Molecular Dynamics Simulations",
    journal = "Journal of Physical Chemistry A",
    year = "2000",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20170719-080126858",
    id = "record",
    issn = "1089-5639",
    doi = "10.1021/jp991985d",
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    title = "The pentamer channel stiffening model for drug action on human rhinovirus HRV-1A",
    journal = "Proceedings of the National Academy of Sciences of the United States of America",
    year = "1997",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20141202-110010303",
    id = "record",
    issn = "0027-8424",
    doi = "10.1073/pnas.94.6.2466",
    volume = "94",
    pmcid = "PMC20111"
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    title = "Constant Temperature Constrained Molecular Dynamics:  The Newton−Euler Inverse Mass Operator Method",
    journal = "Journal of Physical Chemistry",
    year = "1996",
    url = "https://resolver.caltech.edu/CaltechAUTHORS:20180720-145322871",
    id = "record",
    issn = "0022-3654",
    doi = "10.1021/jp953043o",
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